RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PIM1P11309 404 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-219ENST00000518824 MMP11P24347 488 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 SCTRP47872 440 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 GLRBP48167 497 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 Q0VFX4 171 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 HYAL2Q12891 473 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 DSG2Q14126 1118 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 DCAF10Q5QP82 559 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 GARNL3Q5VVW2 1013 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 FAAH2Q6GMR7 532 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 TCTN3Q6NUS6 607 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 SLCO4C1Q6ZQN7 724 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 ASB18Q6ZVZ8 466 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 KLHDC8AQ8IYD2 350 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 OR5T3Q8NGG3 340 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 SLC13A3Q8WWT9 602 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 MIEF2Q96C03 454 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 CYTH2Q99418 400 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 CRB3Q9BUF7 120 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 SARGQ9BW04 601 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 KLHL31Q9H511 634 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 ZNF358Q9NW07 568 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 WWOXQ9NZC7 414 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 HCN3Q9P1Z3 774 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 ZNF282Q9UDV7 671 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-219ENST00000518824 FBXL4Q9UKA2 621 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 PTBP2Q9UKA9 531 aaKnown RBP12.62□□□□□ -0.39
VEGFA-219ENST00000518824 DYRK1BQ9Y463 629 aa12.62□□□□□ -0.39
VEGFA-219ENST00000518824 LRRC14BA6NHZ5 514 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 POC1B-GALNT4F8VUJ3 575 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 AGPSO00116 658 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 NDUFS4O43181 175 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 RDH16O75452 317 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 LTA4HP09960 611 aaKnown RBP12.61□□□□□ -0.39
VEGFA-219ENST00000518824 MTHFD2P13995 350 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 CD22P20273 847 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 GCAP28676 217 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 PHBP35232 272 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 GGT5P36269 586 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 HNF4AP41235 474 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 CD97P48960 835 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 HNMTP50135 292 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 ATP6V0D1P61421 351 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 OLR1P78380 273 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 FAM53BQ14153 422 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 NADK2Q4G0N4 442 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 MED25Q71SY5 747 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 TMEM102Q8N9M5 508 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-219ENST00000518824 CAMKVQ8NCB2 501 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 PDPRQ8NCN5 879 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 OR11G2Q8NGC1 345 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 MVB12AQ96EY5 273 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 GPR78Q96P69 363 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 PAFAH2Q99487 392 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 RBCK1Q9BYM8 510 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 FAM129AQ9BZQ8 928 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 EPN3Q9H201 632 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 EPB41L4BQ9H329 900 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 PELI2Q9HAT8 420 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 ZBTB20Q9HC78 741 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-219ENST00000518824 CD274Q9NZQ7 290 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 C3orf18Q9UK00 162 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 RNF112Q9ULX5 631 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 CDC14AQ9UNH5 594 aa12.61□□□□□ -0.39
VEGFA-219ENST00000518824 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
VEGFA-219ENST00000518824 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 SPTA1P02549 2419 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 A0A096LPK6 155 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 IDSB3KWA1 339 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 PEX12O00623 359 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 TXNDC9O14530 226 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 KLHL18O94889 574 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 ZIC2O95409 532 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 NSA2O95478 260 aaKnown RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 TBX6O95947 436 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 CELA2AP08217 269 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 CD63P08962 238 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 ZNF888P0CJ79 500 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 C1GALT1C1LP0DN25 315 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 CRABP2P29373 138 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 GRK3P35626 688 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 OCA2Q04671 838 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 EEF1A2Q05639 463 aaKnown RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 ILF2Q12905 390 aaKnown RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 CDC16Q13042 620 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 SLBPQ14493 270 aaKnown RBP eCLIP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 RBBP7Q16576 425 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 NDUFA9Q16795 377 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 ATG9BQ674R7 924 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 SULT1C3Q6IMI6 304 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 VN1R5Q7Z5H4 357 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 TBC1D1Q86TI0 1168 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■■■■■ 40.2
VEGFA-219ENST00000518824 AFAP1L2Q8N4X5 818 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 OR51Q1Q8NH59 317 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms