RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 CYP2A7P20853 494 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 OR3A2P47893 321 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 SLC6A12P48065 614 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 HUNKP57058 714 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 IRX1P78414 480 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CYCSP99999 105 aaKnown RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 MAP2K1Q02750 393 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 SCN1BQ07699 218 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 SCARB2Q14108 478 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 TAB1Q15750 504 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 TAZQ16635 292 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 FAM166AQ6J272 317 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CAVIN1Q6NZI2 390 aaKnown RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 PRSS55Q6UWB4 352 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 ABRAXAS1Q6UWZ7 409 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CATSPER4Q7RTX7 472 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CPEB2Q7Z5Q1 589 aaKnown RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 DZIP1Q86YF9 867 aaKnown RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 PRSS35Q8N3Z0 413 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF713Q8N859 430 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 OR5T2Q8NGG2 359 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 OR6S1Q8NH40 331 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 NCOA7Q8NI08 942 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 GRK7Q8WTQ7 553 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 AK8Q96MA6 479 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 NECTIN4Q96NY8 510 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 USP28Q96RU2 1077 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CITED2Q99967 270 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CDK19Q9BWU1 502 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 TRIM6Q9C030 488 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 NYXQ9GZU5 481 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 RIMS4Q9H426 269 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 RAVER2Q9HCJ3 691 aaKnown RBP3.18□□□□□ -1.9
VPS13B-207ENST00000518569 DCAF16Q9NXF7 216 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 PPP1R3CQ9UQK1 317 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 CHD1O14646 1710 aa3.18□□□□□ -1.9
VPS13B-207ENST00000518569 GPRASP1Q5JY77 1395 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 KAT6BQ8WYB5 2073 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 C19orf81C9J6K1 198 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 FAM86B1E9PN63 330 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 CCL24O00175 119 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 SLC30A4O14863 429 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 CEACAM4O75871 244 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 KIAA0754O94854 1291 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 FAM86B2P0C5J1 330 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 STAG3L1P0CL83 205 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 NEFHP12036 1026 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 F3P13726 295 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 GSCP56915 257 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-207ENST00000518569 PTENP60484 403 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 IL10RBQ08334 325 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 C14orf177Q52M58 125 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 LBHQ53QV2 105 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-207ENST00000518569 HECTD3Q5T447 861 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 BSPRYQ5W0U4 402 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 FUT10Q6P4F1 479 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 SLC24A5Q71RS6 500 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 GALNTL5Q7Z4T8 443 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 PRUNE1Q86TP1 453 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 IQCA1Q86XH1 822 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 GBP7Q8N8V2 638 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-207ENST00000518569 CCDC63Q8NA47 563 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 OR8H1Q8NGG4 311 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 DNASE1L2Q92874 299 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 SLCO2A1Q92959 643 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 NSMCE3Q96MG7 304 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 FAM210AQ96ND0 272 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 INTS14Q96SY0 518 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 PIGQQ9BRB3 760 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 ADPGKQ9BRR6 497 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 MCRIP2Q9BUT9 160 aaKnown RBP3.17□□□□□ -1.9
VPS13B-207ENST00000518569 THUMPD3Q9BV44 507 aaKnown RBP3.17□□□□□ -1.9
VPS13B-207ENST00000518569 WWTR1Q9GZV5 400 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 EGLN3Q9H6Z9 239 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 RNF121Q9H920 327 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 COMMD8Q9NX08 183 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 CTNNA3Q9UI47 895 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 FBXL4Q9UKA2 621 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 AGTPBP1Q9UPW5 1226 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 PA2G4Q9UQ80 394 aaKnown RBP3.17□□□□□ -1.9
VPS13B-207ENST00000518569 SELENOKQ9Y6D0 94 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 PRSS21Q9Y6M0 314 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 ARHGEF11O15085 1522 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 SNED1Q8TER0 1413 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 LAMC3Q9Y6N6 1575 aa3.17□□□□□ -1.9
VPS13B-207ENST00000518569 IGLV7-46A0A075B6I9 117 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 SYNJ2BP-COX16A0A087WUM0 186 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 A0A1W2PR80 420 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 TMEM110-MUSTN1A8MSY1 372 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 FAM25EA8MYX2 175 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 KPNA7A9QM74 516 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 NPIPA3F8WFD2 350 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ZNF195O14628 629 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 PPIP5K2O43314 1243 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 DCXO43602 365 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 GAS8-AS1O95177 125 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 MOCS2O96007 188 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-207ENST00000518569 KRT3P12035 628 aa3.16□□□□□ -1.9
VPS13B-207ENST00000518569 ALDH1B1P30837 517 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms