RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 UNKQ9C0B0 810 aaKnown RBP13.78□□□□□ -0.2
SCARNA20.5-201ENST00000516991 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
SCARNA20.5-201ENST00000516991 MMP25Q9NPA2 562 aa13.78□□□□□ -0.2
SCARNA20.5-201ENST00000516991 TAS2R13Q9NYV9 303 aa13.78□□□□□ -0.2
SCARNA20.5-201ENST00000516991 SLC22A7Q9Y694 548 aa13.78□□□□□ -0.2
SCARNA20.5-201ENST00000516991 APCP25054 2843 aa13.78□□□□□ -0.2
SCARNA20.5-201ENST00000516991 IGHV3-20A0A0C4DH32 117 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PABPN1LA6NDY0 278 aaKnown RBP13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 A8MUI8 341 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GOLGA8MH3BSY2 632 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SGK494L7N484 410 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC16A5O15375 505 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PRF1P14222 555 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TAS2R50P59544 299 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MPP1Q00013 466 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HERC3Q15034 1050 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NIPAL1Q6NVV3 410 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PAPD4Q6PIY7 484 aaKnown RBP13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 XKRXQ6PP77 449 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 AGTRAPQ6RW13 159 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 LCTLQ6UWM7 567 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GDF7Q7Z4P5 450 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TBC1D19Q8N5T2 526 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC5A8Q8N695 610 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HORMAD2Q8N7B1 307 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TMEM178AQ8NBL3 297 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MDS2Q8NDY4 140 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ZCCHC10Q8TBK6 192 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 THAP3Q8WTV1 239 aaPredicted RBP13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PCNX1Q96RV3 2341 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 LPAR4Q99677 370 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 UTP23Q9BRU9 249 aaKnown RBP13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SGPP1Q9BX95 441 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PARVBQ9HBI1 364 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PKDREJQ9NTG1 2253 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PDE10AQ9Y233 779 aa13.77□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SCN3AQ9NY46 2000 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MAGEB17A8MXT2 336 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NRDCO43847 1150 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC19A2O60779 497 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 RDH16O75452 317 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HAUS5O94927 633 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CDH1P12830 882 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CD46P15529 392 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 AGAP20933 346 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SNRPNP63162 240 aaKnown RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PMP22Q01453 160 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ACTN3Q08043 901 aaPredicted RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NAE1Q13564 534 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TUBA3CQ13748 450 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ABRAXAS2Q15018 415 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CYP1B1Q16678 543 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 KRTCAP3Q53RY4 240 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HSP90AA5PQ58FG0 334 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CAPN13Q6MZZ7 669 aaPredicted RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TUBA3EQ6PEY2 450 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CCDC137Q6PK04 289 aaKnown RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CRLF3Q8IUI8 442 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 RASGEF1CQ8N431 466 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MFSD9Q8NBP5 474 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 FAM98AQ8NCA5 519 aaKnown RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 C2CD4AQ8NCU7 369 aaPredicted RBP13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PLPP5Q8NEB5 264 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 GRK7Q8WTQ7 553 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC13A3Q8WWT9 602 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PBKQ96KB5 322 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SIGLEC10Q96LC7 697 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NAALAD2Q9Y3Q0 740 aa13.76□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NCOA6Q14686 2063 aaPredicted RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 FEZF1A0PJY2 475 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 TTC4O95801 387 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HIST1H2AGP0C0S8 130 aaPredicted RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 COX6B1P14854 86 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PGAM1P18669 254 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HIST1H2ADP20671 130 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 JAK1P23458 1154 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 HTR1EP28566 365 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 EEF1DP29692 281 aaKnown RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SMSP52788 366 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 AP1S2P56377 157 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 RHAGQ02094 409 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ALDH6A1Q02252 535 aaKnown RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 DHX9Q08211 1270 aaKnown RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 USP10Q14694 798 aaKnown RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 CRYMQ14894 314 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 OR1C1Q15619 314 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NSDHLQ15738 373 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 KCTD19Q17RG1 926 aaPredicted RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SFT2D3Q587I9 215 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 FCRLBQ6BAA4 426 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 MBOAT1Q6ZNC8 495 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 SLC26A11Q86WA9 606 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PDSS2Q86YH6 399 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 PPIL6Q8IXY8 311 aa13.75□□□□□ -0.21
SCARNA20.5-201ENST00000516991 NAT8LQ8N9F0 302 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms