RNA–Protein interactions for RNA: ENST00000516201.1

SCARNA5-201, small Cajal body-specific RNA 5, humanhuman

BASIC

Gene SCARNA5, Length 276 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA5-201ENST00000516201 PLCL2Q9UPR0 1127 aa6.29□□□□□ -1.4
SCARNA5-201ENST00000516201 WASF3Q9UPY6 502 aa6.29□□□□□ -1.4
SCARNA5-201ENST00000516201 KLHL20Q9Y2M5 609 aa6.29□□□□□ -1.4
SCARNA5-201ENST00000516201 TRAF6Q9Y4K3 522 aa6.29□□□□□ -1.4
SCARNA5-201ENST00000516201 PCDHGA3Q9Y5H0 932 aa6.29□□□□□ -1.4
SCARNA5-201ENST00000516201 DNAJC15Q9Y5T4 150 aa6.29□□□□□ -1.4
SCARNA5-201ENST00000516201 NUP210LQ5VU65 1888 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CCDC187A0A096LP49 1063 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SLCO1B7G3V0H7 640 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 H0YGG7 62 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 TXNDC9O14530 226 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ZSCAN9O15535 394 aaPredicted RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 P2RX6O15547 441 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CSO75390 466 aaKnown RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 RASSF9O75901 435 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 DXOO77932 396 aaKnown RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 HSPA4LO95757 839 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ONECUT2O95948 504 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 KRT6AP02538 564 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 KRT6BP04259 564 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 PRR35P0CG20 571 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SMIM10L1P0DMW3 83 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 NEFHP12036 1026 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ACPPP15309 386 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 FOLR1P15328 257 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 TSPAN8P19075 237 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 LSP1P33241 339 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 KRT6CP48668 564 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 HTR6P50406 440 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 RPL14P50914 215 aaKnown RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ARF3P61204 181 aaPredicted RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 GUCY1A3Q02108 690 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ACY1Q03154 408 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CUL3Q13618 768 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 IL11RAQ14626 422 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 PUM1Q14671 1186 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CPSF6Q16630 551 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 HIST2H2ACQ16777 129 aaPredicted RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.46e-46■■□□□ 12.4
SCARNA5-201ENST00000516201 TMEM35AQ53FP2 167 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 TCTE1Q5JU00 501 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SH2D4BQ5SQS7 431 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 HIST2H2AA3Q6FI13 130 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 TMEM214Q6NUQ4 689 aaKnown RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CYB5D1Q6P9G0 228 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 MAVSQ7Z434 540 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ASPGQ86U10 573 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CDYL2Q8N8U2 506 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 GBP7Q8N8V2 638 aaPredicted RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CAMKVQ8NCB2 501 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 PIWIL2Q8TC59 973 aaKnown RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 DYDC1Q8WWB3 177 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ATP6V1E2Q96A05 226 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SMIM10Q96HG1 83 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 C10orf90Q96M02 699 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 LRFN5Q96NI6 719 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SIKE1Q9BRV8 207 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 DDA1Q9BW61 102 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 MS4A8Q9BY19 250 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ZNF717Q9BY31 904 aaPredicted RBP6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ACPTQ9BZG2 426 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 STRADBQ9C0K7 418 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 MEAF6Q9HAF1 191 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 FBXO8Q9NRD0 319 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 FGF21Q9NSA1 209 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 VTI1BQ9UEU0 232 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SNX6Q9UNH7 406 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 PCDHGA8Q9Y5G5 932 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 SLC22A7Q9Y694 548 aa6.28□□□□□ -1.4
SCARNA5-201ENST00000516201 ACACBO00763 2458 aa6.27□□□□□ -1.4
SCARNA5-201ENST00000516201 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 FEZF1A0PJY2 475 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 LRIT2A6NDA9 550 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 MAGEB17A8MXT2 336 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 TMEM233B4DJY2 109 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 TCP11X1B4DZS4 312 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 C4orf51C9J302 202 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 HDAC3O15379 428 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 OR1F1O43749 312 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 HYAL3O43820 417 aaPredicted RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 ULK1O75385 1050 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 RSL1D1O76021 490 aaKnown RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 ETHE1O95571 254 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 PDYNP01213 254 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 JUNP05412 331 aaKnown RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 CTSBP07858 339 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 CSTF2P33240 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 TSFMP43897 325 aaKnown RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 MRPL19P49406 292 aaKnown RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 ITGA1P56199 1179 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 RAB15P59190 212 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 PHEXP78562 749 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 MEF2AQ02078 507 aaPredicted RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 CYP4F3Q08477 520 aa6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 TBL3Q12788 808 aaKnown RBP6.27□□□□□ -1.41
SCARNA5-201ENST00000516201 IFT88Q13099 833 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms