RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PCDHGB6Q9Y5F9 930 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHGB2Q9Y5G2 931 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHGA6Q9Y5G7 932 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHGA5Q9Y5G8 931 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHGA1Q9Y5H4 931 aa7.25□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF729A6NN14 1252 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 KIAA0355O15063 1070 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GRID2O43424 1007 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ANXA9O76027 345 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 PGLSO95336 258 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MOCS2O96007 188 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 NTRK1P04629 796 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 UGT2B4P06133 528 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GP1BAP07359 652 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF8P17098 575 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MAPK1P28482 360 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 IL12AP29459 219 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GRIA4P48058 902 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GLRBP48167 497 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF789Q5FWF6 425 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 TEX30Q5JUR7 227 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MLIPQ5VWP3 458 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MFSD14CQ5VZR4 134 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM219BQ5XKK7 198 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 LRRC8EQ6NSJ5 796 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 PIWIL3Q7Z3Z3 882 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GPAT4Q86UL3 456 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF786Q8N393 782 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 TTC9BQ8N6N2 239 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 CELF2-AS1Q8N7Q2 184 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ZFAND1Q8TCF1 268 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 WFIKKN2Q8TEU8 576 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 EDARADDQ8WWZ3 215 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 FUBP1Q96AE4 644 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 RNF170Q96K19 258 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MARK4Q96L34 752 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 NEU1Q99519 415 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 PELOQ9BRX2 385 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ALX4Q9H161 411 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ATXN3LQ9H3M9 355 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GPN3Q9UHW5 284 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MID2Q9UJV3 735 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 SCML2Q9UQR0 700 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 TLR6Q9Y2C9 796 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 CRYL1Q9Y2S2 319 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 TNPO3Q9Y5L0 923 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 CDY1Q9Y6F8 540 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM95CA0A1B0GW59 222 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 TMEM189-UBE2V1I3L0A0 370 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 SMAD6O43541 496 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 DLX3O60479 287 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 H2AFYO75367 372 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MED6O75586 246 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GPX5O75715 221 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 IGHV2-70P01814 119 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 FBP1P09467 338 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 RD3LP0DJH9 198 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 HAPLN1P10915 354 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GRK4P32298 578 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GEMP55040 296 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MAT1AQ00266 395 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC12A1Q13621 1099 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 USP10Q14694 798 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 NEDD8Q15843 81 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 HSD17B12Q53GQ0 312 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 LUZP2Q86TE4 346 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 TPRA1Q86W33 373 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 UMODL1-AS1Q8N2C9 162 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 SPATA6LQ8N4H0 392 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 RTKNQ9BST9 563 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MND1Q9BWT6 205 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 GSDMCQ9BYG8 508 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 PRRG3Q9BZD7 231 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 WDR55Q9H6Y2 383 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ENTPD7Q9NQZ7 604 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 RBM22Q9NW64 420 aaKnown RBP eCLIP7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ZSCAN32Q9NX65 697 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 XPR1Q9UBH6 696 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 ZDHHC2Q9UIJ5 367 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 PSMD13Q9UNM6 376 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 MGAT4BQ9UQ53 548 aa7.24□□□□□ -1.25
PDLIM5-219ENST00000514743 IGLV3-10A0A075B6K4 115 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 E5RI56 91 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 J3KR12 359 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TO15178 435 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PPM1DO15297 605 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CA12O43570 354 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PMPCBO75439 489 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CNTN5O94779 1100 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 GOSR1O95249 250 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PTTG1O95997 202 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 LAP3P28838 519 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 BMI1P35226 326 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 GRK3P35626 688 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 FCGRTP55899 365 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 RAB10P61026 200 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SNRPD2P62316 118 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ILF2Q12905 390 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ILF3Q12906 894 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 KLF10Q13118 480 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms