RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 IPO13O94829 963 aaKnown RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 ACSL3O95573 720 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 CYC1P08574 325 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 LTA4HP09960 611 aaKnown RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 FAM153BP0C7A2 387 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 C1GALT1C1LP0DN25 315 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 KLC1Q07866 573 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 BMPR2Q13873 1038 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 SLMAPQ14BN4 828 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 ACAP2Q15057 778 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 TBCCQ15814 346 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 FAM153CQ494X1 144 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 VWA2Q5GFL6 755 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 MROH9Q5TGP6 573 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 TIFABQ6ZNK6 161 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 TRMT10CQ7L0Y3 403 aaKnown RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 PRSS41Q7RTY9 318 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 ADCK2Q7Z695 626 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 ASPGQ86U10 573 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 ZC3H7AQ8IWR0 971 aaKnown RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 TMEM151AQ8N4L1 468 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 KCT2Q8NC54 265 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 UBTD2Q8WUN7 234 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 NXNL1Q96CM4 212 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 MOCOSQ96EN8 888 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 CABS1Q96KC9 395 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 SMAD5Q99717 465 aaKnown RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 MACROD1Q9BQ69 325 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 MESP1Q9BRJ9 268 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 CAPS2Q9BXY5 557 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 SLC6A16Q9GZN6 736 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 PITHD1Q9GZP4 211 aaPredicted RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 MKKSQ9NPJ1 570 aaPredicted RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 SNX15Q9NRS6 342 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 SEMA3GQ9NS98 782 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 ABCF3Q9NUQ8 709 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 GPN3Q9UHW5 284 aaPredicted RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 ZNF490Q9ULM2 529 aaPredicted RBP9.21□□□□□ -0.94
RNF4-221ENST00000513643 PCDHGB7Q9Y5F8 929 aa9.21□□□□□ -0.94
RNF4-221ENST00000513643 A0A096LPK6 155 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 EIF4E1BA6NMX2 242 aaKnown RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 MKRN2OSH3BPM6 223 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 RIPK2O43353 540 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 DNAJB6O75190 326 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 STK16O75716 305 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 KLHL2O95198 593 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 BMP10O95393 424 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 IGHEP01854 428 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 SERPINA6P08185 405 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 PLA2G2AP14555 144 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 GNAZP19086 355 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 TFEBP19484 476 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 CD22P20273 847 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 VARSP26640 1264 aaKnown RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 TNFRSF8P28908 595 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 GRK3P35626 688 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 RRADP55042 308 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 IRF9Q00978 393 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 MEF2AQ02078 507 aaPredicted RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 NFATC3Q12968 1075 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 CDC16Q13042 620 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 CHAF1BQ13112 559 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 NDUFA9Q16795 377 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 ADPRMQ3LIE5 342 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 LACTB2Q53H82 288 aaPredicted RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 ADGRD1Q6QNK2 874 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 TMEM205Q6UW68 189 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 IGFL3Q6UXB1 125 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 VN1R5Q7Z5H4 357 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 PLD6Q8N2A8 252 aaKnown RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 METTL27Q8N6F8 245 aaPredicted RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 FDCSPQ8NFU4 85 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 OR11G2Q8NGC1 345 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 OR9A4Q8NGU2 314 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 KCTD4Q8WVF5 259 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 COL26A1Q96A83 441 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 ALKBH8Q96BT7 664 aaKnown RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 MMABQ96EY8 250 aaPredicted RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 FER1L6-AS2Q96M78 137 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 PAFAH2Q99487 392 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 AIF1LQ9BQI0 150 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 CD244Q9BZW8 370 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 RHBGQ9H310 441 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 SOX17Q9H6I2 414 aaPredicted RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 ALG9Q9H6U8 611 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 ZNF552Q9H707 407 aaPredicted RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 CLK4Q9HAZ1 481 aaKnown RBP9.2□□□□□ -0.94
RNF4-221ENST00000513643 C14orf105Q9NVL8 296 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 NUDT4Q9NZJ9 180 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 FETUBQ9UGM5 382 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 TP53TG5Q9Y2B4 290 aa9.2□□□□□ -0.94
RNF4-221ENST00000513643 FLNBO75369 2602 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 COL12A1Q99715 3063 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 A0A087WUV0 522 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 PABPN1LA6NDY0 278 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 NCF1BA6NI72 391 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 NCF1CA8MVU1 366 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 C4orf51C9J302 202 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 PCDH17O14917 1159 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 PRPF4O43172 522 aaKnown RBP eCLIP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms