RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 HIST1H2AGP0C0S8 130 aaPredicted RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 HSD3B1P14060 373 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CD22P20273 847 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 HIST1H2ADP20671 130 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 HSD3B2P26439 372 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TUFMP49411 452 aaKnown RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 RGS6P49758 472 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 DEFA1P59665 94 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 DEFA3P59666 94 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CHIT1Q13231 466 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 PPIGQ13427 754 aaKnown RBP eCLIP11.15□□□□□ -0.625e-7■□□□□ 9.2
SNX25-205ENST00000512853 GAB1Q13480 694 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 SF3B4Q15427 424 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNX25-205ENST00000512853 RGNQ15493 299 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TEAD4Q15561 434 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 ARMCX4Q5H9R4 360 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 PLEKHS1Q5SXH7 462 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 SLC8B1Q6J4K2 584 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CCBE1Q6UXH8 406 aaPredicted RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 GDPD3Q7L5L3 318 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TAS1R1Q7RTX1 841 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TSPAN33Q86UF1 283 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 NLRP8Q86W28 1048 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 HEATR4Q86WZ0 1026 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 RNF175Q8N4F7 328 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 SLC5A8Q8N695 610 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 PAF1Q8N7H5 531 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 C11orf65Q8NCR3 313 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 WDR20Q8TBZ3 569 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 SH3KBP1Q96B97 665 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 HIST1H2AHQ96KK5 128 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 FEVQ99581 238 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 HIST1H2AJQ99878 128 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 H2AFJQ9BTM1 129 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CCDC32Q9BV29 185 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 RUBCNLQ9H714 662 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 THSD1Q9NS62 852 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 RAD18Q9NS91 495 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TMEM184CQ9NVA4 438 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 FBXL12Q9NXK8 326 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 QPCTLQ9NXS2 382 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 AFF4Q9UHB7 1163 aaKnown RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 A0A075B6Q4 140 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 NPIPB15A6NHN6 443 aaPredicted RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 A8MU76 341 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 PSMD11O00231 422 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 OR56A5P0C7T3 313 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 ALOX12P18054 663 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CYP2A7P20853 494 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 RCVRNP35243 200 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 NUP214P35658 2090 aaPredicted RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 ASMTP46597 345 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 GATMP50440 423 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 ANXA8L1Q5VT79 327 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 AGAP6Q5VW22 663 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 RETSATQ6NUM9 610 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CRTC1Q6UUV9 634 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 ZNF605Q86T29 641 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 MMAAQ8IVH4 418 aaKnown RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 NPAS3Q8IXF0 933 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 SYTL1Q8IYJ3 562 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 SLC7A5P1Q8MH63 180 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 STX19Q8N4C7 294 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 IL17RDQ8NFM7 739 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 BCL7CQ8WUZ0 217 aaPredicted RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 AGAP4Q96P64 663 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TMEM175Q9BSA9 504 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 CENPOQ9BU64 300 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 C2orf49Q9BVC5 232 aaPredicted RBP11.15□□□□□ -0.62
SNX25-205ENST00000512853 CDCA4Q9BXL8 241 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 GPR83Q9NYM4 423 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 HCSTQ9UBK5 93 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 VPS29Q9UBQ0 182 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 SLC22A14Q9Y267 594 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 TRAPPC4Q9Y296 219 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 BTBD3Q9Y2F9 522 aa11.15□□□□□ -0.62
SNX25-205ENST00000512853 LOC100506127A0A0U1RQW1 187 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 IGSF6O95976 241 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 ITPKAP23677 461 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 GKP32189 559 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 NR4A2P43354 598 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 NUDT6P53370 316 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 PFN3P60673 137 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 SELENOWP63302 87 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 RAE1P78406 368 aaKnown RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 ZXDBP98169 803 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 LRRC74AQ0VAA2 488 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 CDH18Q13634 790 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 KCNC3Q14003 757 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 CARTPTQ16568 116 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 TIMM50Q3ZCQ8 353 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 ATP13A5Q4VNC0 1218 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 IFI44LQ53G44 452 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 SOWAHCQ53LP3 525 aaPredicted RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 GRHL2Q6ISB3 625 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.14□□□□□ -0.63
SNX25-205ENST00000512853 TPRG1Q6ZUI0 275 aa11.14□□□□□ -0.63
SNX25-205ENST00000512853 TMEM173Q86WV6 379 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms