RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 APCP25054 2843 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SAA2-SAA4A0A096LPE2 208 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 A0A0G2JPF8 293 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 A0A1W2PP11 408 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HNRNPCL2B2RXH8 293 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HNRNPCL3B7ZW38 293 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 CTDSP2O14595 271 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HS3ST1O14792 307 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SLC16A5O15375 505 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 PAPSS1O43252 624 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 TIMM44O43615 452 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HNRNPCL4P0DMR1 293 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HLA-DOBP13765 273 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 MYOD1P15172 320 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 CCND2P30279 289 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 EIF2DP41214 584 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 RAD52P43351 418 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 ACADVLP49748 655 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SUOXP51687 545 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SP4Q02446 784 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 RELQ04864 619 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 EEF1A2Q05639 463 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 ILKQ13418 452 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 PCLAFQ15004 111 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SYT16Q17RD7 645 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HLA-BQ31612 363 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 CFAP58Q5T655 872 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 CYP4A22Q5TCH4 519 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SPSB3Q6PJ21 355 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 KDM7AQ6ZMT4 941 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 ENOSF1Q7L5Y1 443 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 GPR180Q86V85 440 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF444Q8N0Y2 327 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 RASGEF1CQ8N431 466 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 DEFB119Q8N690 84 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 CCDC89Q8N998 374 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 TRIML1Q8N9V2 468 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 IL17RCQ8NAC3 791 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SLC38A9Q8NBW4 561 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 LEMD2Q8NC56 503 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 LNX1Q8TBB1 728 aaPredicted RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 PDCD6IPQ8WUM4 868 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 SORCS1Q8WY21 1168 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 JAKMIP2Q96AA8 810 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HES6Q96HZ4 224 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 DACH2Q96NX9 599 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 MTMR9Q96QG7 549 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 GPR88Q9GZN0 384 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 HRH4Q9H3N8 390 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF556Q9HAH1 456 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 PDE7BQ9NP56 450 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 ASCL3Q9NQ33 180 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 TRMT1Q9NXH9 659 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 RPS6KA6Q9UK32 745 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 MMP17Q9ULZ9 603 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 CCDC168Q8NDH2 2452 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 PI4KAP42356 2102 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 NFASCO94856 1347 aa3.38□□□□□ -1.87
TOPBP1-208ENST00000511439 LRRK1Q38SD2 2015 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 IGHV4OR15-8A0A075B7B6 117 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 A0A1B0GUV1 79 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 LRRC72A6NJI9 287 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 SMTNL1A8MU46 457 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 MEI4A8MW99 385 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 TULP2O00295 520 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 PLPP2O43688 288 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 TMCC2O75069 709 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 RTN2O75298 545 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 ERAL1O75616 437 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 DDHD2O94830 711 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 LDOC1O95751 146 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 LDLRP01130 860 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 SNRNP70P08621 437 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 NR2F1P10589 423 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 ITGA2P17301 1181 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 SAT1P21673 171 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 RBMS1P29558 406 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 USP8P40818 1118 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 OR1G1P47890 313 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 HSD17B4P51659 736 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 PNLIPRP2P54317 469 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 IFI35P80217 286 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 ILF3Q12906 894 aaKnown RBP eCLIP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF234Q14588 700 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 NTRK2Q16620 822 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 OTUD3Q5T2D3 398 aaPredicted RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 FUT10Q6P4F1 479 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 UNQ6126/PRO20091Q6UXV3 157 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 TUBA1AQ71U36 451 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 GALNT5Q7Z7M9 940 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF329Q86UD4 541 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 CCDC190Q86UF4 302 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 SFR1Q86XK3 245 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 SCML4Q8N228 414 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 ELMOD1Q8N336 334 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 EMC1Q8N766 993 aa3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 UTP15Q8TED0 518 aaKnown RBP3.37□□□□□ -1.87
TOPBP1-208ENST00000511439 SLC44A1Q8WWI5 657 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms