RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 RNF11Q9Y3C5 154 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 PCDHB3Q9Y5E6 796 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
NR1I3-227ENST00000510951 WDFY3Q8IZQ1 3526 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 HYKKA2RU49 373 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 WDR91A4D1P6 747 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 TM9SF1O15321 606 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 PRPF4O43172 522 aaKnown RBP eCLIP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SH3BGRLO75368 114 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 ZWINTO95229 277 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 CLDN9O95484 217 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SLC35G6P0C7Q6 338 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 ALAS2P22557 587 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 CXCR2P25025 360 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 CD82P27701 267 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 AHRP35869 848 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 HNF4AP41235 474 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 ETV4P43268 484 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SERPINB4P48594 390 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 RELAQ04206 551 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 TBCCQ15814 346 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 CPSF6Q16630 551 aaKnown RBP eCLIP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 HIST2H2ACQ16777 129 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 PRTGQ2VWP7 1150 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 TOR1AIP1Q5JTV8 583 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 HIST2H2AA3Q6FI13 130 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 LETMD1Q6P1Q0 360 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 MED27Q6P2C8 311 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 C6orf15Q6UXA7 325 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 FRMD7Q6ZUT3 714 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 TTLL10Q6ZVT0 673 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 VASH2Q86V25 355 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 NLGN4XQ8N0W4 816 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 RNF175Q8N4F7 328 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 KCT2Q8NC54 265 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 CAMKVQ8NCB2 501 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 NLGN4YQ8NFZ3 816 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 OR4F6Q8NGB9 312 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SLC13A3Q8WWT9 602 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 FGF11Q92914 225 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 MR1Q95460 341 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SH3GL2Q99962 352 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 NLNQ9BYT8 704 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SHCBP1LQ9BZQ2 653 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 B3GNT4Q9C0J1 378 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 DRC3Q9H069 523 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 ZFP69BQ9UJL9 534 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 SRPK3Q9UPE1 567 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 TMEM184BQ9Y519 407 aaPredicted RBP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 AP1M2Q9Y6Q5 423 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 MAU2Q9Y6X3 613 aa9.92□□□□□ -0.82
NR1I3-227ENST00000510951 URB1O60287 2271 aaKnown RBP9.92□□□□□ -0.82
NR1I3-227ENST00000510951 MAP1BP46821 2468 aaKnown RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 TPRP12270 2363 aaKnown RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 KCNE1BA0A087WTH5 132 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 A0A1B0GX78 115 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 FITM1A5D6W6 292 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ANKDD1BA6NHY2 528 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 DSCR3O14972 297 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 UGDHO60701 494 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 TRIM13O60858 407 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 WFS1O76024 890 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 OR4F21O95013 312 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 OTCP00480 354 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 BPGMP07738 259 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 HBQ1P09105 142 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ZNF888P0CJ79 500 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 LIPCP11150 499 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 IL1RNP18510 177 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 RORAP35398 523 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 CASP2P42575 452 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ATP1A2P50993 1020 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 DNAJB13P59910 316 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 FOXK2Q01167 660 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 RGS1Q08116 209 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 LCP2Q13094 533 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 SRSF6Q13247 344 aaKnown RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 CLN3Q13286 438 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 LAPTM5Q13571 262 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ZRSR2Q15696 482 aaKnown RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 HHATQ5VTY9 493 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 LIPJQ5W064 366 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 TTC19Q6DKK2 380 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 LCN10Q6JVE6 187 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 RHBDD2Q6NTF9 364 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 FAM199XQ6PEV8 388 aaPredicted RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 GPRIN3Q6ZVF9 776 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 PRSS41Q7RTY9 318 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 VN1R5Q7Z5H4 357 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 MILR1Q7Z6M3 343 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 SYVN1Q86TM6 617 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 CACNA2D3Q8IZS8 1091 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 DSELQ8IZU8 1212 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ESX1Q8N693 406 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 IL22RA1Q8N6P7 574 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 CDYL2Q8N8U2 506 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
NR1I3-227ENST00000510951 PPP1R14CQ8TAE6 165 aa9.91□□□□□ -0.82
NR1I3-227ENST00000510951 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms