RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 GPC4O75487 556 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 NDUFS3O75489 264 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SORBS2O94875 1100 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SLCO2B1O94956 709 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 AGFG2O95081 481 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 CAPN1P07384 714 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SNRPB2P08579 225 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 GP1BBP13224 206 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 MAGP20916 626 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 DNAJA1P31689 397 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 BUD31P41223 144 aaPredicted RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 NPY2RP49146 381 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 CSE1LP55060 971 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SNX1Q13596 522 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 GRM7Q14831 915 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SF1Q15637 639 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 DCAF10Q5QP82 559 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 FHL5Q5TD97 284 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 C1orf189Q5VU69 101 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 JMJD6Q6NYC1 403 aaPredicted RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 CLEC18BQ6UXF7 455 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 ZNF534Q76KX8 674 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SDCCAG8Q86SQ7 713 aaPredicted RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 ZNF227Q86WZ6 799 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 IQCKQ8N0W5 287 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 GALNT16Q8N428 558 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 ZBTB2Q8N680 514 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 TTC29Q8NA56 475 aaPredicted RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 CLEC18CQ8NCF0 446 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 FDCSPQ8NFU4 85 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 TRIM58Q8NG06 486 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 OR2L8Q8NGY9 312 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 CFAP61Q8NHU2 1237 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 COG1Q8WTW3 980 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 C1orf54Q8WWF1 131 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 PTERQ96BW5 349 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SMAD5Q99717 465 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 NUDT9Q9BW91 350 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 MRM3Q9HC36 420 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 FAM60AQ9NP50 221 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 FAM114A2Q9NRY5 505 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 EURLQ9NYK6 297 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 IL1RAPL1Q9NZN1 696 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 SLC2A6Q9UGQ3 507 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 PLAGL1Q9UM63 463 aa7.12□□□□□ -1.27
CCSER1-208ENST00000509109 DRG1Q9Y295 367 aaKnown RBP7.12□□□□□ -1.27
CCSER1-208ENST00000509109 LRBAP50851 2863 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 A6NL46 340 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 TARM1B6A8C7 271 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 H3BMH7 237 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 AGPSO00116 658 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 DSCR3O14972 297 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 KLF7O75840 302 aaPredicted RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 FGGP02679 453 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 CBSLP0DN79 551 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ERVK-10P10266 1014 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 TPSB2P20231 275 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 RPS3P23396 243 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 FPR2P25090 351 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 AOAHP28039 575 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ATP5DP30049 168 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 CCR7P32248 378 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 CBSP35520 551 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 GRIA1P42261 906 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 GABRA4P48169 554 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 EIF3BP55884 814 aaKnown RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 SESN2P58004 480 aaPredicted RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 SRSF1Q07955 248 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 AIMP2Q13155 320 aaKnown RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 MYBPC3Q14896 1274 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 TPSAB1Q15661 275 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ZIC1Q15915 447 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 PRSS53Q2L4Q9 553 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 FAM214AQ32MH5 1076 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 TTLL9Q3SXZ7 439 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 NADK2Q4G0N4 442 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 LCN10Q6JVE6 187 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 NAPRTQ6XQN6 538 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 DNAJC22Q8N4W6 341 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 LINC01555Q8NAE3 123 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 FLVCR1-AS1Q8TAF5 88 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 HMGCLL1Q8TB92 370 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ZUFSPQ96AP4 578 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ZNF778Q96MU6 729 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 SELENOSQ9BQE4 189 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ILKAPQ9H0C8 392 aaPredicted RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 CHRAC1Q9NRG0 131 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 TREX1Q9NSU2 369 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 P4HTMQ9NXG6 502 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 UTP6Q9NYH9 597 aaKnown RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 SPATA7Q9P0W8 599 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 SAMD15Q9P1V8 674 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 DHCR7Q9UBM7 475 aaKnown RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 CDC23Q9UJX2 597 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 TTC7AQ9ULT0 858 aaPredicted RBP7.11□□□□□ -1.27
CCSER1-208ENST00000509109 CDYLQ9Y232 598 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 B3GNT3Q9Y2A9 372 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ANKRD12Q6UB98 2062 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
CCSER1-208ENST00000509109 SHANK1Q9Y566 2161 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms