RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PPP4R1Q8TF05 950 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 SLC13A3Q8WWT9 602 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ATP6V1E2Q96A05 226 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 PHF21BQ96EK2 531 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 WDR34Q96EX3 536 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 APOPT1Q96IL0 206 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 VPS50Q96JG6 964 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 SLC45A3Q96JT2 553 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 CATSPER2Q96P56 530 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 GBP5Q96PP8 586 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 CENPKQ9BS16 269 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ERVK-6Q9BXR3 956 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 ACTR8Q9H981 624 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 MKS1Q9NXB0 559 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 IFT80Q9P2H3 777 aaPredicted RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 COPG2Q9UBF2 871 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 CROTQ9UKG9 612 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 RUVBL1Q9Y265 456 aaKnown RBP8.72□□□□□ -1.01
NUP54-207ENST00000508583 PCDHGA11Q9Y5H2 935 aa8.72□□□□□ -1.01
NUP54-207ENST00000508583 LOC105369274A0A096LPK9 316 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 LOC102723532A0A0G2JNH3 316 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 A0A1W2PPM1 405 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 FEZF1A0PJY2 475 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 H0YIG0 161 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 H3BQF6 201 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 E2F3O00716 465 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 PCDH17O14917 1159 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 HCRTR1O43613 425 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CLEC3AO75596 197 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 MLYCDO95822 493 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 SERPIND1P05546 499 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 SERPINA6P08185 405 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 LIFP15018 202 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 PTPN4P29074 926 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 EEF1DP29692 281 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 GMPRP36959 345 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 BCL6P41182 706 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 AGTR2P50052 363 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CCNG1P51959 295 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 YBX1P67809 324 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 OCA2Q04671 838 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 SLC18A2Q05940 514 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 ZNF844Q08AG5 666 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 VAC14Q08AM6 782 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CHIT1Q13231 466 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 DSG2Q14126 1118 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 NCF4Q15080 339 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 TGIF1Q15583 401 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 ZXDCQ2QGD7 858 aaPredicted RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 CEP85LQ5SZL2 805 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 ARHGAP40Q5TG30 622 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 GRHL2Q6ISB3 625 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 MED27Q6P2C8 311 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 SYVN1Q86TM6 617 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 TRABD2AQ86V40 505 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 MYLK4Q86YV6 388 aaPredicted RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 OR4N4Q8N0Y3 316 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 SRFBP1Q8NEF9 429 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 MYRIPQ8NFW9 859 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 NT5CQ8TCD5 201 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CT55Q8WUE5 264 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 STARD8Q92502 1023 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 NACC2Q96BF6 587 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 RNF31Q96EP0 1072 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 IP6K3Q96PC2 410 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 C1QTNF3Q9BXJ4 246 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CHST8Q9H2A9 424 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 IPPKQ9H8X2 491 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 WDR54Q9H977 334 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 CLK4Q9HAZ1 481 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 ANKHQ9HCJ1 492 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 ZNF304Q9HCX3 659 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 ZNF358Q9NW07 568 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 GEMIN8Q9NWZ8 242 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 TMEM216Q9P0N5 145 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 DHCR7Q9UBM7 475 aaKnown RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 ZNF282Q9UDV7 671 aaPredicted RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 SH2B3Q9UQQ2 575 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 ACTL7BQ9Y614 415 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 SLC22A7Q9Y694 548 aa8.71□□□□□ -1.02
NUP54-207ENST00000508583 KMT2BQ9UMN6 2715 aaPredicted RBP8.71□□□□□ -1.02
NUP54-207ENST00000508583 TEX51A0A1B0GUA7 166 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 A8MT66 165 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 K7ENP7 123 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 NRP2O60462 931 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 WFS1O76024 890 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 NSA2O95478 260 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 CLDN9O95484 217 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 ONECUT2O95948 504 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 IGHEP01854 428 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 CYC1P08574 325 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 RPS17P08708 135 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 FBLP22087 321 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 IL10P22301 178 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 VARSP26640 1264 aaKnown RBP8.7□□□□□ -1.02
NUP54-207ENST00000508583 GCGRP47871 477 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 PRKAA2P54646 552 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 DOC2AQ14183 400 aa8.7□□□□□ -1.02
NUP54-207ENST00000508583 E2F2Q14209 437 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms