RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 CLCA2Q9UQC9 943 aa16.69■□□□□ 0.26
TRIM60-203ENST00000508504 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
TRIM60-203ENST00000508504 PTPRBP23467 1997 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 H3BMH7 237 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 PIP5K1BO14986 540 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 NDUFS4O43181 175 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 SERPIND1P05546 499 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 LINC00032P0C843 101 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 CXCR2P25025 360 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 HYAL2Q12891 473 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 HIST2H2ACQ16777 129 aaPredicted RBP16.68■□□□□ 0.26
TRIM60-203ENST00000508504 VWA5B1Q5TIE3 1220 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 HIST2H2AA3Q6FI13 130 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 KMT5CQ86Y97 462 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 CRLF3Q8IUI8 442 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 DTWD1Q8N5C7 304 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 PIWIL2Q8TC59 973 aaKnown RBP16.68■□□□□ 0.26
TRIM60-203ENST00000508504 SELENOMQ8WWX9 145 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 USP7Q93009 1102 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 PMEPA1Q969W9 287 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 C3orf30Q96M34 536 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 TMEM74Q96NL1 305 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 CHRNA10Q9GZZ6 450 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 SPRTNQ9H040 489 aaPredicted RBP16.68■□□□□ 0.26
TRIM60-203ENST00000508504 RABEP2Q9H5N1 569 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 APMAPQ9HDC9 416 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.68■□□□□ 0.26
TRIM60-203ENST00000508504 AP1M2Q9Y6Q5 423 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 SEC16AO15027 2179 aa16.68■□□□□ 0.26
TRIM60-203ENST00000508504 SCN3AQ9NY46 2000 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 FRYQ5TBA9 3013 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 TMEM150CB9EJG8 249 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 C4orf51C9J302 202 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 ZNF195O14628 629 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 ULK1O75385 1050 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 TGFB1P01137 390 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
TRIM60-203ENST00000508504 RPS13P62277 151 aaKnown RBP16.67■□□□□ 0.26
TRIM60-203ENST00000508504 HMGCS1Q01581 520 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 RELAQ04206 551 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 IFT88Q13099 833 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 TRA2AQ13595 282 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRIM60-203ENST00000508504 NAA25Q14CX7 972 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 WDR75Q8IWA0 830 aaKnown RBP16.67■□□□□ 0.26
TRIM60-203ENST00000508504 BMPERQ8N8U9 685 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 KCT2Q8NC54 265 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 OR2T11Q8NH01 316 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 OR1L3Q8NH93 324 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 SLC13A3Q8WWT9 602 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 OR6C1Q96RD1 312 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 RTKNQ9BST9 563 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 NUF2Q9BZD4 464 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 ACPTQ9BZG2 426 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 OR51B5Q9H339 312 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 KLHL31Q9H511 634 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 NT5DC2Q9H857 520 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 DMRT3Q9NQL9 472 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 SNX6Q9UNH7 406 aa16.67■□□□□ 0.26
TRIM60-203ENST00000508504 ATP6AP2A0A1C7CYW4 349 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 ANKDD1BA6NHY2 528 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 EFCAB7A8K855 629 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 SAP18O00422 153 aaKnown RBP16.66■□□□□ 0.26
TRIM60-203ENST00000508504 ATP6AP2O75787 350 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 KRT6AP02538 564 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 KRT6BP04259 564 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 ITIH1P19827 911 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 CSTF2P33240 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRIM60-203ENST00000508504 AHRP35869 848 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 KRT6CP48668 564 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 BTKQ06187 659 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 FOXM1Q08050 763 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 TARDBPQ13148 414 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRIM60-203ENST00000508504 TUBB3Q13509 450 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 WASHC2DQ5SRD0 308 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 AGBL5Q8NDL9 886 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 CCT6BQ92526 530 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 ZNF501Q96CX3 271 aaPredicted RBP16.66■□□□□ 0.26
TRIM60-203ENST00000508504 TM4SF19Q96DZ7 209 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 CTRCQ99895 268 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 PITHD1Q9GZP4 211 aaPredicted RBP16.66■□□□□ 0.26
TRIM60-203ENST00000508504 GIMAP2Q9UG22 337 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 PLCL2Q9UPR0 1127 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 MRPS2Q9Y399 296 aaKnown RBP16.66■□□□□ 0.26
TRIM60-203ENST00000508504 CCL27Q9Y4X3 112 aa16.66■□□□□ 0.26
TRIM60-203ENST00000508504 HGSO14964 777 aaPredicted RBP16.65■□□□□ 0.26
TRIM60-203ENST00000508504 SNUPNO95149 360 aaKnown RBP16.65■□□□□ 0.26
TRIM60-203ENST00000508504 MED26O95402 600 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 TIAF1O95411 115 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 B3GALT4O96024 378 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 ZC3H12BQ5HYM0 836 aaKnown RBP16.65■□□□□ 0.26
TRIM60-203ENST00000508504 Q6ZSR9 355 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 ASPGQ86U10 573 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 DDIASQ8IXT1 998 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 CHCHD4Q8N4Q1 142 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 CSNK1A1LQ8N752 337 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 UBE2E3Q969T4 207 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 MAGEB10Q96LZ2 347 aaPredicted RBP16.65■□□□□ 0.26
TRIM60-203ENST00000508504 ZNF285Q96NJ3 590 aa16.65■□□□□ 0.26
TRIM60-203ENST00000508504 F2RL3Q96RI0 385 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms