RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PRR20EP86478 221 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 PRR20CP86479 221 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 PRR20DP86480 221 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 PRR20BP86481 221 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 PRR20AP86496 221 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 GUCY1A3Q02108 690 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CUL3Q13618 768 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 TSTA3Q13630 321 aaPredicted RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 SLBPQ14493 270 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP46-207ENST00000508499 RBBP7Q16576 425 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 RSPO4Q2I0M5 234 aaPredicted RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 SMU1Q2TAY7 513 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 PRTGQ2VWP7 1150 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 GARNL3Q5VVW2 1013 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 NIPAL1Q6NVV3 410 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 RPS27LQ71UM5 84 aaKnown RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 TMPRSS7Q7RTY8 843 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 AFAP1L2Q8N4X5 818 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 ZNF655Q8N720 491 aaPredicted RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 METTL6Q8TCB7 284 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CREB3L4Q8TEY5 395 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 ZNF473Q8WTR7 871 aaKnown RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 ZNF501Q96CX3 271 aaPredicted RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 FAM122AQ96E09 287 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 C11orf24Q96F05 449 aaPredicted RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 PPM1MQ96MI6 270 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CMKLR1Q99788 373 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 STRADBQ9C0K7 418 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 SPNS1Q9H2V7 528 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CLK4Q9HAZ1 481 aaKnown RBP8.26□□□□□ -1.09
USP46-207ENST00000508499 FAM60AQ9NP50 221 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 ZDHHC2Q9UIJ5 367 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CLCA2Q9UQC9 943 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 SLC22A7Q9Y694 548 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 CFAP54Q96N23 3096 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 KIF26BQ2KJY2 2108 aa8.26□□□□□ -1.09
USP46-207ENST00000508499 PIEZO1Q92508 2521 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 LRIT2A6NDA9 550 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 ANKDD1BA6NHY2 528 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 ZNF195O14628 629 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 HDAC3O15379 428 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 LCMT2O60294 686 aaKnown RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 TBX6O95947 436 aaPredicted RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 ONECUT2O95948 504 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MT-CO3P00414 261 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 SLC35G6P0C7Q6 338 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 PVRP15151 417 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 PTX3P26022 381 aaPredicted RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 CSTF2P33240 577 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP46-207ENST00000508499 BCL6P41182 706 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 RAB15P59190 212 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 IRX1P78414 480 aaPredicted RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 PHEXP78562 749 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 SIM1P81133 766 aaPredicted RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 MC2RQ01718 297 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 HYAL2Q12891 473 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 IFT88Q13099 833 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 FAM53BQ14153 422 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 PUM1Q14671 1186 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP46-207ENST00000508499 ZRSR2Q15696 482 aaKnown RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 CPSF6Q16630 551 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP46-207ENST00000508499 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP46-207ENST00000508499 TMEM35AQ53FP2 167 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 XKR7Q5GH72 579 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 SH2D4BQ5SQS7 431 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 TLDC1Q6P9B6 456 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MED25Q71SY5 747 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 VN1R5Q7Z5H4 357 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 VN1R4Q7Z5H5 301 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 B3GNT8Q7Z7M8 397 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 TRIM73Q86UV7 250 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 CRLF3Q8IUI8 442 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP46-207ENST00000508499 ZNF781Q8N8C0 355 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 CDYL2Q8N8U2 506 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 CAMKVQ8NCB2 501 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 ZNF740Q8NDX6 193 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 SRFBP1Q8NEF9 429 aaKnown RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 HUS1BQ8NHY5 278 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MOCOSQ96EN8 888 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MVB12AQ96EY5 273 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MAELQ96JY0 434 aaKnown RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 CDK15Q96Q40 435 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 TEFMQ96QE5 360 aaKnown RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 ZPBPQ9BS86 351 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MS4A8Q9BY19 250 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 ELOVL6Q9H5J4 265 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 MEAF6Q9HAF1 191 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 FANCEQ9HB96 536 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 TNFRSF12AQ9NP84 129 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 DMRT3Q9NQL9 472 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 ABCF3Q9NUQ8 709 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 NMRK1Q9NWW6 199 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 AKAP7Q9P0M2 348 aaPredicted RBP8.25□□□□□ -1.09
USP46-207ENST00000508499 ADAM21Q9UKJ8 722 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 CCL27Q9Y4X3 112 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
USP46-207ENST00000508499 PCDHGA8Q9Y5G5 932 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms