RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 HSD3B2P26439 372 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 KRT6CP48668 564 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 ARFIP1P53367 373 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 MAPK10P53779 464 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 CDH13P55290 713 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 WDR4P57081 412 aaKnown RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 VSX2P58304 361 aaPredicted RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 ARF3P61204 181 aaPredicted RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 STXBP1P61764 594 aaKnown RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 YBX1P67809 324 aaKnown RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 TGM3Q08188 693 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 IFT88Q13099 833 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 MPP2Q14168 576 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 MUM1Q2TAK8 710 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 PRTGQ2VWP7 1150 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 ATG16L1Q676U5 607 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 RHBDD2Q6NTF9 364 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 FBXO42Q6P3S6 717 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 RNF165Q6ZSG1 346 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 VN1R4Q7Z5H5 301 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 MILR1Q7Z6M3 343 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 TMEM126BQ8IUX1 230 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 AFAP1L2Q8N4X5 818 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 OR4F6Q8NGB9 312 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 OR1L3Q8NH93 324 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 NT5CQ8TCD5 201 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 TRPC4APQ8TEL6 797 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 TM4SF19Q96DZ7 209 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 PRR11Q96HE9 360 aaPredicted RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 SLC46A1Q96NT5 459 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 C17orf62Q9BQA9 187 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 CENPKQ9BS16 269 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 NDC1Q9BTX1 674 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 MECRQ9BV79 373 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 GATA5Q9BWX5 397 aaPredicted RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 ULBP3Q9BZM4 244 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 SPNS1Q9H2V7 528 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 ELOVL6Q9H5J4 265 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 PSD3Q9NYI0 1048 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 DKK4Q9UBT3 224 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 TMEM184BQ9Y519 407 aaPredicted RBP9.79□□□□□ -0.84
HTT-204ENST00000508321 USP24Q9UPU5 2620 aa9.79□□□□□ -0.84
HTT-204ENST00000508321 A0A088AWK7 358 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 A0A1B0GX78 115 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 FEZF1A0PJY2 475 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 STMND1H3BQB6 276 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 FOXE1O00358 373 aaPredicted RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 NRP2O60462 931 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 PRAMEF10O60809 474 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 PRAMEF4O60810 478 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 CRCPO75575 148 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 SEMA3DO95025 777 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 CHEK2O96017 543 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ZNF10P21506 573 aaPredicted RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 HMOX2P30519 316 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ETV5P41161 510 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 TSFMP43897 325 aaKnown RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 GCGRP47871 477 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 MEF2AQ02078 507 aaPredicted RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 FAM53BQ14153 422 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 HERC3Q15034 1050 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 RBBP5Q15291 538 aaKnown RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 ZRSR2Q15696 482 aaKnown RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 CHI3L2Q15782 390 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 CPSF6Q16630 551 aaKnown RBP eCLIP9.78□□□□□ -0.84
HTT-204ENST00000508321 TMEM35AQ53FP2 167 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 PRAMEF9Q5VWM5 478 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 FRG2Q64ET8 278 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 TTC19Q6DKK2 380 aaPredicted RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 FRMPD2BQ6IN97 320 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 LETMD1Q6P1Q0 360 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 PRMT9Q6P2P2 845 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ABHD13Q7L211 337 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 CUZD1Q86UP6 607 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ANKRD53Q8N9V6 530 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 SRFBP1Q8NEF9 429 aaKnown RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 OR7G3Q8NG95 312 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 MGARPQ8TDB4 240 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 DYDC1Q8WWB3 177 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 SLC13A3Q8WWT9 602 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 USP7Q93009 1102 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 GAL3ST3Q96A11 431 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 FRG2BQ96QU4 278 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 PAIP2Q9BPZ3 127 aaKnown RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 SLC7A5P2Q9GIP4 190 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 SLC6A16Q9GZN6 736 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ACTR5Q9H9F9 607 aaPredicted RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 BRF2Q9HAW0 419 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 MID1IP1Q9NPA3 183 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 ASCL3Q9NQ33 180 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 PFDN4Q9NQP4 134 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 TXLNGQ9NUQ3 528 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 INTS9Q9NV88 658 aaKnown RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.78□□□□□ -0.84
HTT-204ENST00000508321 B3GALT1Q9Y5Z6 326 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 SLC22A7Q9Y694 548 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 SDK2Q58EX2 2172 aa9.78□□□□□ -0.84
HTT-204ENST00000508321 LOC105369274A0A096LPK9 316 aa9.77□□□□□ -0.85
HTT-204ENST00000508321 LOC102723532A0A0G2JNH3 316 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms