RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 FAM72CH0Y354 149 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 PLEKP08567 350 aaPredicted RBP7.31□□□□□ -1.24
PFDN1-202ENST00000507185 RNF224P0DH78 156 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 ALOX12P18054 663 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 EPHB2P29323 1055 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 SDC4P31431 198 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 CASP14P31944 242 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 GGT5P36269 586 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 MMP12P39900 470 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 SUOXP51687 545 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 PRKAG1P54619 331 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 LOXL3P58215 753 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 SF3A3Q12874 501 aaKnown RBP eCLIP7.31□□□□□ -1.24
PFDN1-202ENST00000507185 FOXF2Q12947 444 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 EXOC3L4Q17RC7 722 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 EIF2S3LQ2VIR3 472 aaKnown RBP7.31□□□□□ -1.24
PFDN1-202ENST00000507185 RAB6CQ53S08 254 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 FAM72AQ5TYM5 149 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 NAA35Q5VZE5 725 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 RAET1GQ6H3X3 334 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 DGAT2L7PQ6IED9 249 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 CAPRIN2Q6IMN6 1127 aaKnown RBP7.31□□□□□ -1.24
PFDN1-202ENST00000507185 FAM72DQ6L9T8 149 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 SCYL2Q6P3W7 929 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 BRAT1Q6PJG6 821 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 TMEM135Q86UB9 458 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 FAM72BQ86X60 149 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 SPARTQ8N0X7 666 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 POC1BQ8TC44 478 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 CREB3L4Q8TEY5 395 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 ABHD5Q8WTS1 349 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 NUS1Q96E22 293 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 STAMBPL1Q96FJ0 436 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 PGAP3Q96FM1 320 aaPredicted RBP7.31□□□□□ -1.24
PFDN1-202ENST00000507185 FAM81BQ96LP2 452 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 TEFMQ96QE5 360 aaKnown RBP7.31□□□□□ -1.24
PFDN1-202ENST00000507185 ULBP3Q9BZM4 244 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 TRIM5Q9C035 493 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 RAB6CQ9H0N0 254 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 ATP13A3Q9H7F0 1226 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 APMAPQ9HDC9 416 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 TMEM248Q9NWD8 314 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 DNAJC12Q9UKB3 198 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 MAN1B1Q9UKM7 699 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 SUFUQ9UMX1 484 aa7.31□□□□□ -1.24
PFDN1-202ENST00000507185 ZFC3H1O60293 1989 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 FAM237AA0A1B0GTK4 181 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 LINC00473A8K010 186 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 AGPSO00116 658 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 POLR1CO15160 346 aaPredicted RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 PPM1DO15297 605 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 FGFR1OPO95684 399 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 PGM1P36871 562 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 DCTP40126 519 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 MTIF2P46199 727 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 BCL2L1Q07817 233 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 TUBB3Q13509 450 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 PEX6Q13608 980 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 FAM153CQ494X1 144 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 TTI2Q6NXR4 508 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 PNCKQ6P2M8 343 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 TMEM71Q6P5X7 295 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 TIPARPQ7Z3E1 657 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 NLRP14Q86W24 1093 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 NRROSQ86YC3 692 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 PELI3Q8N2H9 469 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 CCDC185Q8N715 623 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 MBD3L2Q8NHZ7 208 aaPredicted RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 TMEM171Q8WVE6 324 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 RXFP2Q8WXD0 754 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 SHC3Q92529 594 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 KTI12Q96EK9 354 aaPredicted RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 CELF6Q96J87 481 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 HIST1H2AAQ96QV6 131 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 CINPQ9BW66 212 aaPredicted RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 STN1Q9H668 368 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 PLSCR4Q9NRQ2 329 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 KLC4Q9NSK0 619 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 RCOR3Q9P2K3 495 aaPredicted RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 LHX3Q9UBR4 397 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 LNPEPQ9UIQ6 1025 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 USP22Q9UPT9 525 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 CAMK2AQ9UQM7 478 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 ATP6V1DQ9Y5K8 247 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 LRRK2Q5S007 2527 aa7.3□□□□□ -1.24
PFDN1-202ENST00000507185 TLN1Q9Y490 2541 aaKnown RBP7.3□□□□□ -1.24
PFDN1-202ENST00000507185 SPTAN1Q13813 2472 aaKnown RBP7.29□□□□□ -1.24
PFDN1-202ENST00000507185 TDRD6O60522 2096 aaKnown RBP7.29□□□□□ -1.24
PFDN1-202ENST00000507185 USP9XQ93008 2570 aaPredicted RBP7.29□□□□□ -1.24
PFDN1-202ENST00000507185 DFFAO00273 331 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 TRIAP1O43715 76 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 PALMO75781 387 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 TNFRSF8P28908 595 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 PPP1R2P41236 205 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 PGDP52209 483 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 PROK1P58294 105 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 ZBED6P86452 979 aa7.29□□□□□ -1.24
PFDN1-202ENST00000507185 SRSF4Q08170 494 aaKnown RBP7.29□□□□□ -1.24
PFDN1-202ENST00000507185 RALGDSQ12967 914 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms