RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 DHRS4L1P0CG22 281 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CDH1P12830 882 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 PTX3P26022 381 aaPredicted RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 RORAP35398 523 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ETV4P43268 484 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 AVPR1BP47901 424 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 GLRBP48167 497 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 KCNC1P48547 511 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 KRT6CP48668 564 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 SEPHS1P49903 392 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 DCDP81605 110 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CLCQ05315 142 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ZIC1Q15915 447 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ZXDCQ2QGD7 858 aaPredicted RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 XKR6Q5GH73 641 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CFAP157Q5JU67 520 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 UBAP2Q5T6F2 1119 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 TMEM214Q6NUQ4 689 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 LRRC69Q6ZNQ3 347 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 TMPRSS11BQ86T26 416 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ASPGQ86U10 573 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 PROSER1Q86XN7 944 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 DSELQ8IZU8 1212 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 AFAP1L2Q8N4X5 818 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CSNK1A1LQ8N752 337 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 FAM76AQ8TAV0 307 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 SLC13A3Q8WWT9 602 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 GAL3ST3Q96A11 431 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CMTM7Q96FZ5 175 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 PRAP1Q96NZ9 151 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 QRFPRQ96P65 431 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 OR1F2PQ96R84 312 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 SLC6A16Q9GZN6 736 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 IPPKQ9H8X2 491 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ACTR8Q9H981 624 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 GEMIN8Q9NWZ8 242 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 OCIAD1Q9NX40 245 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 MS4A12Q9NXJ0 267 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 NKIRAS1Q9NYS0 192 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 AHSPQ9NZD4 102 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CPSF2Q9P2I0 782 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 KLHL3Q9UH77 587 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 IKZF3Q9UKT9 509 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 FREM2Q5SZK8 3169 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MED19A0JLT2 244 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 HYKKA2RU49 373 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 NCF1BA6NI72 391 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 NCF1CA8MVU1 366 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 TMEM114B3SHH9 223 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 G3V2L1 256 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 H0YGG7 62 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MEN1O00255 615 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 DYNC1I1O14576 645 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 KLF11O14901 512 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF749O43361 778 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 DLX3O60479 287 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PRAMEF10O60809 474 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 GUCY1B2O75343 617 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 CHEK2O96017 543 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 FGF4P08620 206 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 F7P08709 466 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SBK3P0C264 359 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 NEFHP12036 1026 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 CCL4P13236 92 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 NCF1P14598 390 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ACPPP15309 386 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 DDX5P17844 614 aaKnown RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PSMB5P28074 263 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 EEF1DP29692 281 aaKnown RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 STAT5AP42229 794 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MAPK10P53779 464 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ARF3P61204 181 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PPP1CAP62136 330 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 RPS15P62841 145 aaKnown RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 IRX1P78414 480 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 CSTF3Q12996 717 aaKnown RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 IFT88Q13099 833 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 CHIT1Q13231 466 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 TSTA3Q13630 321 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 DSG2Q14126 1118 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SMU1Q2TAY7 513 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 WASHC2DQ5SRD0 308 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 FRG2Q64ET8 278 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF385CQ66K41 422 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PWWP2BQ6NUJ5 590 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MBOAT1Q6ZNC8 495 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 FRMD7Q6ZUT3 714 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PAGE2Q7Z2X7 111 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 GOLGA7Q7Z5G4 137 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ADCK2Q7Z695 626 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MILR1Q7Z6M3 343 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SYVN1Q86TM6 617 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 EXOC3L1Q86VI1 746 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ARHGEF39Q8N4T4 335 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ARFGAP2Q8N6H7 521 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 TEX9Q8N6V9 391 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SNX31Q8N9S9 440 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms