RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF248Q8NDW4 579 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ARMC2Q8NEN0 867 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 TTLQ8NG68 377 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ZBTB9Q96C00 473 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 TLCD1Q96CP7 247 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 SEC16BQ96JE7 1060 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 FAM111AQ96PZ2 611 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 TMEM237Q96Q45 408 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 NDC1Q9BTX1 674 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 NTMT1Q9BV86 223 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ZBTB26Q9HCK0 441 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 OXSMQ9NWU1 459 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC17A7Q9P2U7 560 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 ZFP69BQ9UJL9 534 aa11.36□□□□□ -0.59
PDLIM5-208ENST00000504489 PTPRQQ9UMZ3 2332 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 OR7A17O14581 309 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 DSCR3O14972 297 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 TM9SF1O15321 606 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 P2RX6O15547 441 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 PRPF4O43172 522 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 RAD1O60671 282 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 SUPT7LO94864 414 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 EIF2S1P05198 315 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 LIPCP11150 499 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 RORAP35398 523 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 HNF4AP41235 474 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 CCNG1P51959 295 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 PWP1Q13610 501 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 PCLAFQ15004 111 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 RBBP5Q15291 538 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 HIST2H2ACQ16777 129 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 HIST2H2AA3Q6FI13 130 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 GRHL2Q6ISB3 625 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF517Q6ZMY9 492 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ASPGQ86U10 573 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 DSELQ8IZU8 1212 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 NLGN4XQ8N0W4 816 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ARHGEF39Q8N4T4 335 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ESX1Q8N693 406 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ANKRD53Q8N9V6 530 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 L3MBTL4Q8NA19 623 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 GALNT6Q8NCL4 622 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 TRPV3Q8NET8 790 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 NLGN4YQ8NFZ3 816 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 PROKR1Q8TCW9 393 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC13A3Q8WWT9 602 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 NKD1Q969G9 470 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 UBE2E3Q969T4 207 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 CLIP3Q96DZ5 547 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 NSUN5Q96P11 429 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 DPH2Q9BQC3 489 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 NLNQ9BYT8 704 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 DPH1Q9BZG8 443 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC7A5P2Q9GIP4 190 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 RHBGQ9H310 441 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 NOL11Q9H8H0 719 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ACTR8Q9H981 624 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 STARD5Q9NSY2 213 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 CUTCQ9NTM9 273 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 PADI1Q9ULC6 663 aa11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF490Q9ULM2 529 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 RUVBL1Q9Y265 456 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-208ENST00000504489 TEX51A0A1B0GUA7 166 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 MEN1O00255 615 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 TRIM13O60858 407 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ZWINTO95229 277 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 CLDN9O95484 217 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ONECUT2O95948 504 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 OTCP00480 354 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 KLK3P07288 261 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 SERPINA6P08185 405 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC35G6P0C7Q6 338 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 CCNYL3P0C7X3 344 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 EIF2S3P41091 472 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ETV4P43268 484 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 SLC18A1P54219 525 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 NAGLUP54802 743 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 CDH13P55290 713 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 CLCQ05315 142 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ABHD18Q0P651 414 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ASPHQ12797 758 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 TRAF3Q13114 568 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 GPS2Q13227 327 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 FAM53BQ14153 422 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 HKDC1Q2TB90 917 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 LIPMQ5VYY2 423 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ZNF385CQ66K41 422 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 MED27Q6P2C8 311 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 RPS27LQ71UM5 84 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 PROSER1Q86XN7 944 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 C10orf107Q8IVU9 208 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 LAS2Q8IYD9 372 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 CACNA2D3Q8IZS8 1091 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 OR52B6Q8NGF0 335 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 NT5CQ8TCD5 201 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 CREB3L4Q8TEY5 395 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms