RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 A0A1B0GVL5 298 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ANKRD30BLA7E2S9 258 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 A8MUI8 341 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 GOLGA8RI6L899 631 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 M0QZ24 198 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ABLIM1O14639 778 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SIVA1O15304 175 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CALUO43852 315 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 SH3BGRLO75368 114 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CNTN5O94779 1100 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 MYO1DO94832 1006 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ELANEP08246 267 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 LINGO3P0C6S8 592 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 RD3LP0DJH9 198 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CCL2P13500 99 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PRKACAP17612 351 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 NDUFS1P28331 727 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 HIBADHP31937 336 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PTGFRP43088 359 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 OR3A1P47881 315 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 STK19P49842 368 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 MAB21L1Q13394 359 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 R3HDM1Q15032 1099 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CDO1Q16878 200 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 AMZ1Q400G9 498 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ARMC6Q6NXE6 501 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 EFCAB12Q6NXP0 572 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 BLOC1S2Q6QNY1 142 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 FAM124AQ86V42 546 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 FBXL16Q8N461 479 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF808Q8N4W9 903 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 HCAR2Q8TDS4 363 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 MAP4K1Q92918 833 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 IGSF21Q96ID5 467 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ELMO2Q96JJ3 720 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 EGFL8Q99944 293 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 NDEL1Q9GZM8 345 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 OR10A2Q9H208 303 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF768Q9H5H4 540 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 KCNK12Q9HB15 430 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 PIH1D3Q9NQM4 214 aaKnown RBP4.98□□□□□ -1.61
NIPBL-204ENST00000504430 CHMP2BQ9UQN3 213 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 VWA7Q9Y334 891 aa4.98□□□□□ -1.61
NIPBL-204ENST00000504430 DUXAA6NLW8 204 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 DLGAP1O14490 977 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 RAD51BO15315 384 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 GOT2P00505 430 aaKnown RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 STSP08842 583 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF182P17025 639 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CD80P33681 288 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 TRIM23P36406 574 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ID1P41134 155 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ARRB1P49407 418 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 METAP2P50579 478 aaKnown RBP eCLIP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 RAB11AP62491 216 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CHRNEQ04844 493 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 LRRC63Q05C16 580 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 RAB11BQ15907 218 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 PPP6R3Q5H9R7 873 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 TREML2Q5T2D2 321 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ADNP2Q6IQ32 1131 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 KCTD8Q6ZWB6 473 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 LUZP2Q86TE4 346 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CDKL3Q8IVW4 592 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ARID3BQ8IVW6 561 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CAVIN3Q969G5 261 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 RHBDF1Q96CC6 855 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 OPTNQ96CV9 577 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 HAVCR1Q96D42 359 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 MSI2Q96DH6 328 aaKnown RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CADM1Q9BY67 442 aaKnown RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ENTPD7Q9NQZ7 604 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 ANKRD10Q9NXR5 420 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 RAPGEFL1Q9UHV5 662 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 DHDHQ9UQ10 334 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CEPT1Q9Y6K0 416 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 NPC1L1Q9UHC9 1359 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 A0A1W2PPK0 400 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 PRR23D1E9PI22 279 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 VCYO14598 125 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 PRYO14603 147 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 GNB5O14775 395 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 SUV39H1O43463 412 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 PRR23D2P0DMB1 279 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CPA3P15088 417 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 TNNI3P19429 210 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 AVPR1AP37288 418 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 EIF2S3P41091 472 aaKnown RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 MTCP1P56278 107 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CSNK2A1P68400 391 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-204ENST00000504430 DNASE1L3Q13609 305 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 AWAT1Q58HT5 328 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 GPR157Q5UAW9 335 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 LIPNQ5VXI9 398 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 B3GLCTQ6Y288 498 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 NEK8Q86SG6 692 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 SVOPQ8N4V2 548 aa4.97□□□□□ -1.61
NIPBL-204ENST00000504430 CSNK2A3Q8NEV1 391 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms