RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 GIMAP5Q96F15 307 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 HMCESQ96FZ2 354 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 CDKN2AIPNLQ96HQ2 116 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 CDK15Q96Q40 435 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 CNPPD1Q9BV87 410 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 CDCA4Q9BXL8 241 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 DPY30Q9C005 99 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 MICAL3Q7RTP6 2002 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 PPM1BO75688 479 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 HOXB1P14653 301 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 PSMA3P25788 255 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 MAP2K3P46734 347 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 UBE3AQ05086 875 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 RUNX1T1Q06455 604 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 ABRAXAS2Q15018 415 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 SPANXN4Q5MJ08 99 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 TMEM81Q6P7N7 255 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 AFTPHQ6ULP2 937 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 KLHL5Q96PQ7 755 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 OR5M11Q96RB7 305 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 OSMRQ99650 979 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 KCNH6Q9H252 994 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 PPIL3Q9H2H8 161 aaKnown RBP17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 ABCC13Q9NSE7 274 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 NLE1Q9NVX2 485 aaPredicted RBP17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 GINS2Q9Y248 185 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 VPS9D1Q9Y2B5 631 aa17.25■□□□□ 0.35
POLR2J3-209ENST00000504157 OR7A17O14581 309 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 FHP07954 510 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 SLC2A4P14672 509 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GPC1P35052 558 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 PTPRCAPQ14761 206 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 PTGR1Q14914 329 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 LARS2Q15031 903 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GRK1Q15835 563 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 TTLL9Q3SXZ7 439 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 CLLU1Q5K131 121 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 LCN1P1Q5VSP4 162 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 TAPT1Q6NXT6 567 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GDPGP1Q6ZNW5 385 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 C16orf62Q7Z3J2 963 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 DCBLD1Q8N8Z6 715 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 OR4F6Q8NGB9 312 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 OR8K5Q8NH50 307 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GBF1Q92538 1859 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 AKAP1Q92667 903 aaKnown RBP eCLIP17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 SP110Q9HB58 689 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RBFOX1Q9NWB1 397 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 PIN4Q9Y237 131 aaKnown RBP17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RPS10-NUDT3A0A1W2PQS6 291 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 FABP12A6NFH5 140 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 MOXD2PA6NHM9 499 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RRN3P2A6NIE6 340 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 OR5K4A6NMS3 321 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 PTGESO14684 152 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RGS14O43566 566 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 OTCP00480 354 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RAF1P04049 648 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 FAM157BP0CG42 384 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 RHOQP17081 205 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 NUDT6P53370 316 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GTDC1Q4AE62 458 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GPR139Q6DWJ6 353 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GPR153Q6NV75 609 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 GOLGA7Q7Z5G4 137 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 LINC00469Q8N7U9 141 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 ZBTB44Q8NCP5 570 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 ARRDC4Q8NCT1 418 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 LPCAT1Q8NF37 534 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 ESAMQ96AP7 390 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 DACT3Q96B18 629 aaPredicted RBP17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 QRFPRQ96P65 431 aa17.24■□□□□ 0.35
POLR2J3-209ENST00000504157 SLC28A1O00337 649 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 GFRA2O00451 464 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 NDUFS3O75489 264 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 ZNF682O95780 498 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 FABP3P05413 133 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 TPOP07202 933 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 HAPLN1P10915 354 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 PCSK1P29120 753 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 ZNF140P52738 457 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 CLDN20P56880 219 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 IL2P60568 153 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 UBE2J2Q8N2K1 259 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 C10orf111Q8N326 155 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 FBXW5Q969U6 566 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 MYLPFQ96A32 169 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 MIXL1Q9H2W2 232 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 TMEM248Q9NWD8 314 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 THUMPD1Q9NXG2 353 aaKnown RBP17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 A0A1W2PRG6 482 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 SLC43A1O75387 559 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 DIRAS1O95057 198 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 HLA-DQB1P01920 261 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 RRASP10301 218 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 GABRB1P18505 474 aa17.23■□□□□ 0.35
POLR2J3-209ENST00000504157 ATF6P18850 670 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms