RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 AP3M2P53677 418 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 MFAP3P55082 362 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 MTCP1P56278 107 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 HSF2Q03933 536 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 LIPEQ05469 1076 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 PRKAA1Q13131 559 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 STIM1Q13586 685 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 CARTPTQ16568 116 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM41BQ5BJD5 291 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 PRAMEF19Q5SWL8 479 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 TSTD2Q5T7W7 516 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ALS2CLQ60I27 953 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 KIRREL2Q6UWL6 708 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 B3GLCTQ6Y288 498 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF813Q6ZN06 617 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 RNF207Q6ZRF8 634 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 KLBQ86Z14 1044 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 MISPQ8IVT2 679 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 MINDY2Q8NBR6 621 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 STKLD1Q8NE28 680 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM71CQ8NEG0 241 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 BBS10Q8TAM1 723 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 WIPF2Q8TF74 440 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAR1Q8WVX9 515 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 WBP2Q969T9 261 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 DHX58Q96C10 678 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 FBXL8Q96CD0 374 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ERLEC1Q96DZ1 483 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 DAZAP1Q96EP5 407 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 NRBF2Q96F24 287 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 C4orf36Q96KX1 117 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 IFT74Q96LB3 600 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 SMC6Q96SB8 1091 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 SEPHS2Q99611 448 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 RIOK1Q9BRS2 568 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATG101Q9BSB4 218 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ADGRE3Q9BY15 652 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 TSPYL1Q9H0U9 437 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 HAUS4Q9H6D7 363 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 DNAJC4Q9NNZ3 241 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 PCDHA12Q9UN75 941 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 TNNQ9UQP3 1299 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF510Q9Y2H8 683 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 PADI2Q9Y2J8 665 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 DDX49Q9Y6V7 483 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 COMMD3-BMI1R4GMX3 469 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 A3GALT2U3KPV4 340 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 RANBP2P49792 3224 aaKnown RBP4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 THSD7BQ9C0I4 1608 aa4.12□□□□□ -1.75
HMGB1P21-201ENST00000502313 MYH3P11055 1940 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A075B6Q4 140 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A1W2PN81 502 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM8BA6NDV4 472 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM247A6NEH6 219 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CXorf65A6NEN9 183 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ASB14A6NK59 587 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 MEI4A8MW99 385 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 E9PI62 339 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 FLRT2O43155 660 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CSO75390 466 aaKnown RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 GMNNO75496 209 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CIAO1O76071 339 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF18P17022 549 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ENGP17813 658 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 FPR3P25089 353 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CHRNA7P36544 502 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 MAGEA1P43355 309 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 AVPR1BP47901 424 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ASCL1P50553 236 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PLCD1P51178 756 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CACNA2D1P54289 1103 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATP5IP56385 69 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ROR2Q01974 943 aaKnown RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CNTN2Q02246 1040 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ARHGAP1Q07960 439 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 HSPA14Q0VDF9 509 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ITGADQ13349 1161 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 HNRNPDQ14103 355 aaKnown RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 GK2Q14410 553 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 MELKQ14680 651 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PTPAQ15257 358 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CTU2Q2VPK5 515 aaKnown RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 LRIT3Q3SXY7 679 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM153CQ494X1 144 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PLK5Q496M5 336 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 SYTL3Q4VX76 610 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 LACTB2Q53H82 288 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 LY6G5CQ5SRR4 150 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 DCST1Q5T197 706 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ABHD17BQ5VST6 288 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CST9Q5W186 159 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 KLC3Q6P597 504 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 VWA1Q6PCB0 445 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 DHRS13Q6UX07 377 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 BTNL8Q6UX41 500 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 SIGLEC15Q6ZMC9 328 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PQLC2Q6ZP29 291 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 NANOGNBQ7Z5D8 188 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 WDR53Q7Z5U6 358 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms