RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 TPP2P29144 1249 aaPredicted RBP15.46■□□□□ 0.07
VIM-208ENST00000497849 XCR1P46094 333 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 AGTR2P50052 363 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 EIF3EP60228 445 aaKnown RBP15.46■□□□□ 0.07
VIM-208ENST00000497849 PTK6Q13882 451 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 TMED2Q15363 201 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 SFT2D3Q587I9 215 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 DARS2Q6PI48 645 aaKnown RBP15.46■□□□□ 0.07
VIM-208ENST00000497849 ZNF662Q6ZS27 426 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 RPS19BP1Q86WX3 136 aaKnown RBP15.46■□□□□ 0.07
VIM-208ENST00000497849 KRT35Q92764 455 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 RERGQ96A58 199 aaPredicted RBP15.46■□□□□ 0.07
VIM-208ENST00000497849 MBD6Q96DN6 1003 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 C18orf12Q96KH6 178 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 TTC1Q99614 292 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 LRRC40Q9H9A6 602 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 RASSF1Q9NS23 344 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 PCYOX1Q9UHG3 505 aa15.46■□□□□ 0.07
VIM-208ENST00000497849 CDK2AP1O14519 115 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 TXNDC9O14530 226 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 NDC80O14777 642 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 ZSCAN12O43309 604 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 PRMT3O60678 531 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 NSA2O95478 260 aaKnown RBP15.45■□□□□ 0.06
VIM-208ENST00000497849 STATHP02808 62 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 CCNFP41002 786 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 CYB561P49447 251 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 DGKQP52824 942 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 ITGA8P53708 1063 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 SLC26A5P58743 744 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 TAS2R50P59544 299 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 SNTB1Q13884 538 aaKnown RBP15.45■□□□□ 0.06
VIM-208ENST00000497849 USP10Q14694 798 aaKnown RBP15.45■□□□□ 0.06
VIM-208ENST00000497849 PARP6Q2NL67 630 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 CCDC181Q5TID7 509 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 AFTPHQ6ULP2 937 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 LDB1Q86U70 411 aaPredicted RBP15.45■□□□□ 0.06
VIM-208ENST00000497849 PLD3Q8IV08 490 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 SULF2Q8IWU5 870 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 KIF2BQ8N4N8 673 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 RNF10Q8N5U6 811 aaKnown RBP15.45■□□□□ 0.06
VIM-208ENST00000497849 OR4L1Q8NH43 312 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 C16orf52Q8NHV5 167 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 ELP5Q8TE02 316 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 SKA2Q8WVK7 121 aaPredicted RBP15.45■□□□□ 0.06
VIM-208ENST00000497849 LPAR4Q99677 370 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 HCN3Q9P1Z3 774 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 MRFAP1Q9Y605 127 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 STAB1Q9NY15 2570 aa15.45■□□□□ 0.06
VIM-208ENST00000497849 FBN1P35555 2871 aaKnown RBP15.44■□□□□ 0.06
VIM-208ENST00000497849 PKMP14618 531 aaKnown RBP15.44■□□□□ 0.06
VIM-208ENST00000497849 EZRP15311 586 aaKnown RBP15.44■□□□□ 0.06
VIM-208ENST00000497849 RELAQ04206 551 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 PRDX1Q06830 199 aaKnown RBP15.44■□□□□ 0.06
VIM-208ENST00000497849 NDUFA9Q16795 377 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.44■□□□□ 0.06
VIM-208ENST00000497849 ICE2Q659A1 982 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 ARHGAP11AQ6P4F7 1023 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 ARSKQ6UWY0 536 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 ACAD11Q709F0 780 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 CAMKMTQ7Z624 323 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 PCGF5Q86SE9 256 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 CDC20BQ86Y33 519 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 OR52N2Q8NGI0 321 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 ZNF778Q96MU6 729 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 PWWP2AQ96N64 755 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 TAC3Q9UHF0 121 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 AMFRQ9UKV5 643 aa15.44■□□□□ 0.06
VIM-208ENST00000497849 ARHGEF33A8MVX0 844 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 PRMT5O14744 637 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 HAT1O14929 419 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 PDE9AO76083 593 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 INHBBP09529 407 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 ADSLP30566 484 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 TRHRP34981 398 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 RPA3P35244 121 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 BCL6P41182 706 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 RHAGQ02094 409 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 ACVR1Q04771 509 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 ACTN3Q08043 901 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 CLEC9AQ6UXN8 241 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 PEX26Q7Z412 305 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 LIX1LQ8IVB5 337 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 ZFP62Q8NB50 900 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 PLPP5Q8NEB5 264 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 MYRIPQ8NFW9 859 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 SPATA3Q8NHX4 192 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 GSDMBQ8TAX9 411 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 MAGEC3Q8TD91 643 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 SMPDL3AQ92484 453 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 TSLPQ969D9 159 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 P2RY12Q9H244 342 aa15.43■□□□□ 0.06
VIM-208ENST00000497849 KLF13Q9Y2Y9 288 aaPredicted RBP15.43■□□□□ 0.06
VIM-208ENST00000497849 KLRC4-KLRK1H3BQV0 150 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 SGK494L7N484 410 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 PEX1O43933 1283 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 MATN4O95460 622 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 HEXAP06865 529 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 IL1RNP18510 177 aa15.42■□□□□ 0.06
VIM-208ENST00000497849 CTNNA2P26232 953 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms