RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 LSRQ86X29 649 aaPredicted RBP11.11□□□□□ -0.63
CDCA7-208ENST00000496441 TTC29Q8NA56 475 aaPredicted RBP11.11□□□□□ -0.63
CDCA7-208ENST00000496441 ZNF540Q8NDQ6 660 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 PIK3C3Q8NEB9 887 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 OR13F1Q8NGS4 319 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 KLK6Q92876 244 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 NRBF2Q96F24 287 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 THUMPD1Q9NXG2 353 aaKnown RBP11.11□□□□□ -0.63
CDCA7-208ENST00000496441 TBC1D14Q9P2M4 693 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 RHCGQ9UBD6 479 aa11.11□□□□□ -0.63
CDCA7-208ENST00000496441 GRXCR1A8MXD5 290 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 BCL10O95999 233 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 VIPP01282 170 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 NPPBP16860 134 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PSMB9P28065 219 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 HTR1BP28222 390 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 RRM2P31350 389 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PRIM2P49643 509 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
CDCA7-208ENST00000496441 TAS2R50P59544 299 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 FPGSQ05932 587 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 ATP1A4Q13733 1029 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 GANABQ14697 944 aaKnown RBP11.1□□□□□ -0.63
CDCA7-208ENST00000496441 SPCS2Q15005 226 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 METTL2BQ6P1Q9 378 aaKnown RBP11.1□□□□□ -0.63
CDCA7-208ENST00000496441 MED27Q6P2C8 311 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 C16orf87Q6PH81 154 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 COMMD6Q7Z4G1 85 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 C11orf96Q7Z7L8 435 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 HIPK1Q86Z02 1210 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 SNX29P2Q8IUI4 249 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 NPAS3Q8IXF0 933 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 CHPFQ8IZ52 775 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PLA2G15Q8NCC3 412 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 VPS37AQ8NEZ2 397 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 OR5AR1Q8NGP9 310 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 ADAMTS16Q8TE57 1224 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 REEP1Q9H902 201 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
CDCA7-208ENST00000496441 MTCL1Q9Y4B5 1905 aaKnown RBP11.1□□□□□ -0.63
CDCA7-208ENST00000496441 LRRK1Q38SD2 2015 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 SLC5A10A0PJK1 596 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 TRIM64CA6NLI5 447 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 NPC1O15118 1278 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 POP7O75817 140 aaKnown RBP11.1□□□□□ -0.63
CDCA7-208ENST00000496441 C1orf105O95561 183 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 C6P13671 934 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 TGFBR1P36897 503 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PRLHRP49683 370 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 ARMCX6Q7L4S7 300 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 HMGN2P46Q86SG4 172 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PLD3Q8IV08 490 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 ATL1Q8WXF7 558 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 TANKQ92844 425 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 TMEM184CQ9NVA4 438 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PCDHB11Q9Y5F2 797 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 PTPRSQ13332 1948 aa11.1□□□□□ -0.63
CDCA7-208ENST00000496441 LAMA1P25391 3075 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 J3KTA2 159 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 ZNF197O14709 1029 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 SLC16A5O15375 505 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 SUV39H1O43463 412 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 SH3BP5O60239 455 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 HPRP00739 348 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 IDSP22304 550 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 CHI3L1P36222 383 aaPredicted RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 MLLT10P55197 1068 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 EMX1Q04741 257 aaPredicted RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 CSTF3Q12996 717 aaKnown RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 RGNQ15493 299 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 ZNF691Q5VV52 312 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 GRHL2Q6ISB3 625 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 CAPN13Q6MZZ7 669 aaPredicted RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 DUS1LQ6P1R4 473 aaKnown RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 AHSA2Q719I0 299 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 DPPA4Q7L190 304 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 FAM20CQ8IXL6 584 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 FAM9CQ8IZT9 166 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 SPPL3Q8TCT6 385 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 HDAC2Q92769 488 aaKnown RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 ARRDC3Q96B67 414 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 NUS1Q96E22 293 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 DTNBP1Q96EV8 351 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 DYRK1BQ9Y463 629 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 FEZF1A0PJY2 475 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 TBC1D3BA6NDS4 549 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 EIF3FO00303 357 aaPredicted RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 ZNF8P17098 575 aaPredicted RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 HOXB9P17482 250 aaPredicted RBP11.09□□□□□ -0.63
CDCA7-208ENST00000496441 GPX2P18283 190 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 PSMB5P28074 263 aa11.09□□□□□ -0.63
CDCA7-208ENST00000496441 IDH2P48735 452 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms