RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 MTERF1Q99551 399 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 GSDMCQ9BYG8 508 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 CLMPQ9H6B4 373 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 KIR3DX1Q9H7L2 352 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 S100A14Q9HCY8 104 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 FZD3Q9NPG1 666 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 IMP3Q9NV31 184 aaKnown RBP9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ATAD3AQ9NVI7 634 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SIRT5Q9NXA8 310 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 ABCD2Q9UBJ2 740 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 PCOLCE2Q9UKZ9 415 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 KCNK6Q9Y257 313 aa9.87□□□□□ -0.83
HDAC3-214ENST00000495485 SPTY2D1-AS1A0A0U1RR47 76 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 LNP1A1A4G5 178 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 PIPSLA2A3N6 862 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 POM121BA6NF01 834 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 MAP3K7O43318 606 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 PCDHGA12O60330 932 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 FKBP9O95302 570 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 ANP32DO95626 131 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 BAG2O95816 211 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 PGRP06401 933 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 MTHFD1P11586 935 aaKnown RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 CTSEP14091 401 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 HOXB6P17509 224 aaKnown RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 ENGP17813 658 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 MAOBP27338 520 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 HOXD11P31277 338 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 HPCAL1P37235 193 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 CCT8P50990 548 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 SLC7A2P52569 658 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 NXPH1P58417 271 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 C21orf58P58505 322 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 HNRNPKP61978 463 aaKnown RBP eCLIP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 CEACAM7Q14002 265 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 RBBP5Q15291 538 aaKnown RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 TLR1Q15399 786 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 ANXA8L1Q5VT79 327 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 C8orf82Q6P1X6 216 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 SUSD1Q6UWL2 747 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 GCNT7Q6ZNI0 430 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 Q6ZSR6 202 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 PARGQ86W56 976 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 TRIM48Q8IWZ4 208 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 DEFB119Q8N690 84 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 HUS1BQ8NHY5 278 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 CHTF18Q8WVB6 975 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 FCRL1Q96LA6 429 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 BMFQ96LC9 184 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 APOLD1Q96LR9 279 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 SLC6A18Q96N87 628 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 ELF4Q99607 663 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 MYOCQ99972 504 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 ECSITQ9BQ95 431 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 GPATCH1Q9BRR8 931 aaKnown RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 EDEM2Q9BV94 578 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 EBF2Q9HAK2 575 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 IL1RL2Q9HB29 575 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 SLC52A3Q9NQ40 469 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 TM7SF3Q9NS93 570 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 GEMIN8Q9NWZ8 242 aaKnown RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 FAM120CQ9NX05 1096 aaKnown RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 OR6C2Q9NZP2 312 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 C6orf203Q9P0P8 240 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-214ENST00000495485 CD300AQ9UGN4 299 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 TAC3Q9UHF0 121 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 RAPGEFL1Q9UHV5 662 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 DGKBQ9Y6T7 804 aa9.86□□□□□ -0.83
HDAC3-214ENST00000495485 GNG14A0A1W2PPG7 69 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ARHGAP10A1A4S6 786 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 AQP12BA6NM10 295 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 MAGEB17A8MXT2 336 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 EVPLLA8MZ36 301 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ANKRD28O15084 1053 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 KRT36O76013 467 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 SEMA3DO95025 777 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ANXA4P09525 319 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 UMPSP11172 480 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CDH1P12830 882 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ANPEPP15144 967 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 PPIBP23284 216 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 SLC6A2P23975 617 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 HTR1EP28566 365 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 IL12AP29459 219 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 PKLRP30613 574 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 TIA1P31483 386 aaKnown RBP eCLIP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ACTR1BP42025 376 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 KIR3DL1P43629 444 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 TRPC1P48995 793 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CSNK1EP49674 416 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ARFIP1P53367 373 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 CLDN2P57739 230 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ACTR1AP61163 376 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 PRDX1Q06830 199 aaKnown RBP9.85□□□□□ -0.83
HDAC3-214ENST00000495485 ZNF763Q0D2J5 394 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 RPE65Q16518 533 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 PGS1Q32NB8 556 aa9.85□□□□□ -0.83
HDAC3-214ENST00000495485 FAM174BQ3ZCQ3 159 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms