RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 LRRC73Q5JTD7 316 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 CTR9Q6PD62 1173 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 KIF6Q6ZMV9 814 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 SPATA21Q7Z572 469 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 VSIG1Q86XK7 387 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 FAM219AQ8IW50 185 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 OR7A2PQ8NGA2 310 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 OR6S1Q8NH40 331 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 METTL21AQ8WXB1 218 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 NSMAFQ92636 917 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 PDLIM5Q96HC4 596 aaKnown RBP2.98□□□□□ -1.93
VPS50-219ENST00000495039 C10orf90Q96M02 699 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 SPATA33Q96N06 139 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 ZMAT2Q96NC0 199 aaKnown RBP2.98□□□□□ -1.93
VPS50-219ENST00000495039 MAP3K3Q99759 626 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 NKX3-1Q99801 234 aaPredicted RBP2.98□□□□□ -1.93
VPS50-219ENST00000495039 MGME1Q9BQP7 344 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 ZCCHC17Q9NP64 241 aaKnown RBP2.98□□□□□ -1.93
VPS50-219ENST00000495039 ZNF510Q9Y2H8 683 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 PPP2R2CQ9Y2T4 447 aa2.98□□□□□ -1.93
VPS50-219ENST00000495039 ARHGEF37A1IGU5 675 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 HSPA4LO95757 839 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 SLC2A2P11168 524 aaPredicted RBP2.97□□□□□ -1.93
VPS50-219ENST00000495039 TCF4P15884 667 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 BCL3P20749 454 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 DRD3P35462 400 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 RGS7P49802 495 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 DNA2P51530 1060 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 CAPZA1P52907 286 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 LBX1P52954 281 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 MTCP1P56278 107 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 CLDN15P56746 228 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 OPCMLQ14982 345 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 PTGISQ16647 500 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 UGCGQ16739 394 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 FAM174BQ3ZCQ3 159 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 FAM133BQ5BKY9 247 aaKnown RBP2.97□□□□□ -1.93
VPS50-219ENST00000495039 SPECC1Q5M775 1068 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 SLC25A47Q6Q0C1 308 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 MOXD1Q6UVY6 613 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 VITQ6UXI7 678 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 ABI3BPQ7Z7G0 1075 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 ADCK1Q86TW2 530 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 AMIGO1Q86WK6 493 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 METTL23Q86XA0 190 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 THNSL1Q8IYQ7 743 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 OR1L3Q8NH93 324 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 MAPK15Q8TD08 544 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 TSACCQ96A04 125 aaPredicted RBP2.97□□□□□ -1.93
VPS50-219ENST00000495039 C4orf45Q96LM5 186 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 NECTIN4Q96NY8 510 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 EDEM3Q9BZQ6 932 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 THAP2Q9H0W7 228 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 ACTL8Q9H568 366 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 PKD2L2Q9NZM6 624 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 B4GALT7Q9UBV7 327 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 ARID2Q68CP9 1835 aa2.97□□□□□ -1.93
VPS50-219ENST00000495039 IGSF1Q8N6C5 1336 aa2.96□□□□□ -1.93
VPS50-219ENST00000495039 A0A087WV48 116 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 SNURFLB1AK76 121 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 FPGTO14772 594 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 WDR46O15213 610 aaKnown RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 SEC24AO95486 1093 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 VTNP04004 478 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 GBAP04062 536 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 STAG3L1P0CL83 205 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 THEGLP0DJG4 465 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 SCG2P13521 617 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 EPORP19235 508 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 ALDH1B1P30837 517 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 GP5P40197 560 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 CRKLP46109 303 aaKnown RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 MFAP3P55082 362 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 CACNG1Q06432 222 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 EXT1Q16394 746 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 RBBP7Q16576 425 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 BTN2A1Q7KYR7 527 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 NRARPQ7Z6K4 114 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 DNAJB7Q7Z6W7 309 aaPredicted RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 SLC25A42Q86VD7 318 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 ZBED8Q8IZ13 594 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 KLHDC1Q8N7A1 406 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 SUMF1Q8NBK3 374 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 SLC37A3Q8NCC5 494 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 C9orf43Q8TAL5 461 aaPredicted RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 CHPT1Q8WUD6 406 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 APOBEC4Q8WW27 367 aaKnown RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 SPATA17Q96L03 361 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 CDCA3Q99618 268 aaPredicted RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 LPAR4Q99677 370 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 SDCBP2Q9H190 292 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 MAN2C1Q9NTJ4 1040 aa2.96□□□□□ -1.94
VPS50-219ENST00000495039 ZNF256Q9Y2P7 627 aaPredicted RBP2.96□□□□□ -1.94
VPS50-219ENST00000495039 IL16Q14005 1332 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 TRBV5-5A0A0J9YX44 114 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 HTR3EA5X5Y0 456 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 A8MXK9 166 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 H0YAE9 185 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 KRT33AO76009 404 aa2.95□□□□□ -1.94
VPS50-219ENST00000495039 SERPING1P05155 500 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms