RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PLIN3O60664 434 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PROCP04070 461 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 MYZAPP0CAP1 466 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 EPORP19235 508 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 CASP2P42575 452 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 RPS15P62841 145 aaKnown RBP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 CYP4F2P78329 520 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PCDH1Q08174 1060 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PWP1Q13610 501 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 COL9A2Q14055 689 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 TBCCQ15814 346 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 ZNF385CQ66K41 422 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PRMT9Q6P2P2 845 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 ZNF517Q6ZMY9 492 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 MYLK4Q86YV6 388 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 RDH11Q8TC12 318 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PPP4R1Q8TF05 950 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 TM4SF19Q96DZ7 209 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 MVB12AQ96EY5 273 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 GPR87Q9BY21 358 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 DRC3Q9H069 523 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 IPPKQ9H8X2 491 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 ACTR8Q9H981 624 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 AKIRIN1Q9H9L7 192 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-209ENST00000494255 PCTPQ9UKL6 214 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 EMCNQ9ULC0 261 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 FRYQ5TBA9 3013 aa11.88□□□□□ -0.51
TRA2A-209ENST00000494255 URADA6NGE7 173 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ANKDD1BA6NHY2 528 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 GOLGA6L10A6NI86 522 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 RPS17P08708 135 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 CD63P08962 238 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 RAB40ALP0C0E4 278 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 HNF4AP41235 474 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 CCNG1P51959 295 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 HERVK_113P63132 956 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SRSF6Q13247 344 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 FAM53BQ14153 422 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SLC9A5Q14940 896 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 LIPJQ5W064 366 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 LCN10Q6JVE6 187 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 MED27Q6P2C8 311 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 FAM198BQ6UWH4 519 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ZYG11AQ6WRX3 759 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■■■ 34.8
TRA2A-209ENST00000494255 METTL27Q8N6F8 245 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 BANPQ8N9N5 519 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ZCCHC10Q8TBK6 192 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 NT5CQ8TCD5 201 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 CCT6BQ92526 530 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SEC16BQ96JE7 1060 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SLC45A3Q96JT2 553 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 MACROD1Q9BQ69 325 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ERVK-6Q9BXR3 956 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 STMN4Q9H169 189 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ZNF304Q9HCX3 659 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 FARSAQ9Y285 508 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PADI2Q9Y2J8 665 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PCDHGA6Q9Y5G7 932 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ZNF891A8MT65 544 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 UGDHO60701 494 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PRAMEF4O60810 478 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SPAG7O75391 227 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 WFS1O76024 890 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SUPT7LO94864 414 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 FBLP22087 321 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PTPN4P29074 926 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 HPDP32754 393 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 AVPR1BP47901 424 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PRKAA2P54646 552 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 STXBP1P61764 594 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 SKP1P63208 163 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 MC1RQ01726 317 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 VAC14Q08AM6 782 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 NCF4Q15080 339 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 RBBP7Q16576 425 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ARHGAP40Q5TG30 622 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PRAMEF9Q5VWM5 478 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 MLIPQ5VWP3 458 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 GRHL2Q6ISB3 625 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 KCT2Q8NC54 265 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 STARD8Q92502 1023 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 COL26A1Q96A83 441 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 MMABQ96EY8 250 aaPredicted RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 NSUN5Q96P11 429 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 C1QTNF3Q9BXJ4 246 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 NOL11Q9H8H0 719 aaKnown RBP11.87□□□□□ -0.51
TRA2A-209ENST00000494255 ANKHQ9HCJ1 492 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 COPG2Q9UBF2 871 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 IL17BQ9UHF5 180 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 PLLPQ9Y342 182 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 MAU2Q9Y6X3 613 aa11.87□□□□□ -0.51
TRA2A-209ENST00000494255 A0A0A6YYC8 382 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-209ENST00000494255 I3L1I5 382 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-209ENST00000494255 TERTO14746 1132 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms