RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CHPFQ8IZ52 775 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 NRSN1Q8IZ57 195 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 SYNPOQ8N3V7 929 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 FAM86B1Q8N7N1 296 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 SKA2Q8WVK7 121 aaPredicted RBP11.1□□□□□ -0.63
RFC4-214ENST00000494047 SLC38A4Q969I6 547 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 TMEM159Q96B96 161 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 EFHD2Q96C19 240 aaPredicted RBP11.1□□□□□ -0.63
RFC4-214ENST00000494047 HSH2DQ96JZ2 352 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 B3GALT6Q96L58 329 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 APOLD1Q96LR9 279 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 TSSK3Q96PN8 268 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 HBEGFQ99075 208 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 RNF38Q9H0F5 515 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 IKZF5Q9H5V7 419 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 TMEM38AQ9H6F2 299 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 TPT1P8Q9HAU6 139 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 ITM2CQ9NQX7 267 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 THUMPD1Q9NXG2 353 aaKnown RBP11.1□□□□□ -0.63
RFC4-214ENST00000494047 PDP1Q9P0J1 537 aaPredicted RBP11.1□□□□□ -0.63
RFC4-214ENST00000494047 DAPK2Q9UIK4 370 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 USP22Q9UPT9 525 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 DLGAP4Q9Y2H0 992 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 KCNE2Q9Y6J6 123 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 PRSS21Q9Y6M0 314 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 HELZP42694 1942 aaKnown RBP11.1□□□□□ -0.63
RFC4-214ENST00000494047 DENND4CQ5VZ89 1909 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 A0A0C4DFX4 3053 aa11.1□□□□□ -0.63
RFC4-214ENST00000494047 PLXNA2O75051 1894 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 C2orf78A6NCI8 922 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 MGAT4DA6NG13 374 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 MYO1GB0I1T2 1018 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 E9PQ18 207 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 FOXE1O00358 373 aaPredicted RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 GREM1O60565 184 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 ATG13O75143 517 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 KCNK5O95279 499 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 CKMP06732 381 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 SRCP12931 536 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 ITGB6P18564 788 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 EPORP19235 508 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 RPL10P27635 214 aaKnown RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 VIPR1P32241 457 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 CCR7P32248 378 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 S100A5P33763 92 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 GDF5P43026 501 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 PPP5CP53041 499 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 COPZ1P61923 177 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 CDC20Q12834 499 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 LMAN2Q12907 356 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 ZNF630Q2M218 657 aaPredicted RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 EML3Q32P44 896 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 SGO1Q5FBB7 561 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 AGAP7PQ5VUJ5 663 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 CCDC80Q76M96 950 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 DDX53Q86TM3 631 aaKnown RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 ZSWIM9Q86XI8 627 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 SLC39A11Q8N1S5 342 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 GPR26Q8NDV2 337 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 OR6Q1Q8NGQ2 317 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 WDR20Q8TBZ3 569 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 RASSF5Q8WWW0 418 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 GEMIN6Q8WXD5 167 aaKnown RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 COQ8BQ96D53 544 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 WDR34Q96EX3 536 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 ZNF514Q96K75 400 aaPredicted RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 MAPKAP1Q9BPZ7 522 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 COL25A1Q9BXS0 654 aaPredicted RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 RUBCNLQ9H714 662 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 SYNDIG1Q9H7V2 258 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 CARS2Q9HA77 564 aaKnown RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 ACOT13Q9NPJ3 140 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 CNOT2Q9NZN8 540 aaKnown RBP11.09□□□□□ -0.63
RFC4-214ENST00000494047 RAPGEFL1Q9UHV5 662 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 ATP6V1HQ9UI12 483 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 PCDHGA10Q9Y5H3 936 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 ATG2AQ2TAZ0 1938 aa11.09□□□□□ -0.63
RFC4-214ENST00000494047 OR2A25A4D2G3 310 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 EFCAB10A6NFE3 127 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 NPIPB15A6NHN6 443 aaPredicted RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 PTGES3LE9PB15 166 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 PDE9AO76083 593 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 SEC24AO95486 1093 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 NADKO95544 446 aaPredicted RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 LRG1P02750 347 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 GSNP06396 782 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 PSMB9P28065 219 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
RFC4-214ENST00000494047 SOX6P35712 828 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 GGT2P36268 569 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 CLK1P49759 484 aaKnown RBP11.08□□□□□ -0.64
RFC4-214ENST00000494047 DEFA1P59665 94 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 DEFA3P59666 94 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 ZNF763Q0D2J5 394 aa11.08□□□□□ -0.64
RFC4-214ENST00000494047 HSPA14Q0VDF9 509 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms