RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TGDSO95455 350 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 ETHE1O95571 254 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 HK2P52789 917 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 ARF3P61204 181 aaPredicted RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 INSM1Q01101 510 aaPredicted RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 NR6A1Q15406 480 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 GPR19Q15760 415 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 RBM44Q6ZP01 1051 aaKnown RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 VN1R4Q7Z5H5 301 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 ZNF473Q8WTR7 871 aaKnown RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 N4BP2L2Q92802 583 aaPredicted RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 RERGQ96A58 199 aaPredicted RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 OR2A5Q96R48 311 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 DPYSL5Q9BPU6 564 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 PITHD1Q9GZP4 211 aaPredicted RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 OR51B5Q9H339 312 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 NT5DC2Q9H857 520 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 ZFP69BQ9UJL9 534 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 SDHDO14521 159 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 ALOX15P16050 662 aaPredicted RBP18.51■□□□□ 0.55
USP39-218ENST00000493829 IDH3AP50213 366 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 SIM1P81133 766 aaPredicted RBP18.51■□□□□ 0.55
USP39-218ENST00000493829 HKDC1Q2TB90 917 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 GALNTL6Q49A17 601 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 XKR7Q5GH72 579 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 SPDYAQ5MJ70 313 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 NXNQ6DKJ4 435 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 ASPGQ86U10 573 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 MCATQ8IVS2 390 aaKnown RBP18.51■□□□□ 0.55
USP39-218ENST00000493829 DNAJC22Q8N4W6 341 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 KLHL6Q8WZ60 621 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 TUBGCP3Q96CW5 907 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 RNF31Q96EP0 1072 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 OR52B2Q96RD2 323 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 RHBGQ9H310 441 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 MEAF6Q9HAF1 191 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 KCNK13Q9HB14 408 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 KLHL14Q9P2G3 628 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 CDV3Q9UKY7 258 aaKnown RBP18.51■□□□□ 0.55
USP39-218ENST00000493829 AP1M2Q9Y6Q5 423 aa18.51■□□□□ 0.55
USP39-218ENST00000493829 MDC1Q14676 2089 aaKnown RBP18.51■□□□□ 0.55
USP39-218ENST00000493829 FTH1P19P0C7X4 201 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 FOLR1P15328 257 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 NELFEP18615 380 aaKnown RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 ILKQ13418 452 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 CLPPQ16740 277 aaPredicted RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 ZC3H12BQ5HYM0 836 aaKnown RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 TOR1AIP1Q5JTV8 583 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 EPGNQ6UW88 154 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 SLCO6A1Q86UG4 719 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 CARFQ8N187 725 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 CSNK1A1LQ8N752 337 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 ZCCHC10Q8TBK6 192 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 CREB3L4Q8TEY5 395 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 SLC13A3Q8WWT9 602 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 SLC41A2Q96JW4 573 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 TMEM150CB9EJG8 249 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 SLC28A1O00337 649 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 RGS14O43566 566 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 HYAL3O43820 417 aaPredicted RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 PEX11AO75192 247 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 FAM107AO95990 144 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 ANKRD34CP0C6C1 535 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 HNRNPH1P31943 449 aaKnown RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 AHRP35869 848 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 PIK3CBP42338 1070 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 NOVA1P51513 510 aaKnown RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 INHBCP55103 352 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 CSTF3Q12996 717 aaKnown RBP18.5■□□□□ 0.55
USP39-218ENST00000493829 C16orf72Q14CZ0 275 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 ARHGAP22Q7Z5H3 698 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 GLRX5Q86SX6 157 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 TTLQ8NG68 377 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 WDR48Q8TAF3 677 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 F2RL3Q96RI0 385 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 SARGQ9BW04 601 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 MS4A8Q9BY19 250 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 SEMA5BQ9P283 1151 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 PDP2Q9P2J9 529 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 PCDHGA1Q9Y5H4 931 aa18.5■□□□□ 0.55
USP39-218ENST00000493829 A0A0G2JN53 185 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 SRRM3A6NNA2 597 aaPredicted RBP18.49■□□□□ 0.55
USP39-218ENST00000493829 TOX3O15405 576 aaPredicted RBP18.49■□□□□ 0.55
USP39-218ENST00000493829 TBX6O95947 436 aaPredicted RBP18.49■□□□□ 0.55
USP39-218ENST00000493829 SLC35G6P0C7Q6 338 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 ARFIP2P53365 341 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 E2F1Q01094 437 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 TMTC4Q5T4D3 741 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 Q6ZSR9 355 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 TRIM46Q7Z4K8 759 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 KMT5CQ86Y97 462 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 D2HGDHQ8N465 521 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 CHCHD4Q8N4Q1 142 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 KCT2Q8NC54 265 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 C10orf82Q8WW14 230 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 MARK4Q96L34 752 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 RILPQ96NA2 401 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 MRPL1Q9BYD6 325 aaKnown RBP18.49■□□□□ 0.55
USP39-218ENST00000493829 KLHL31Q9H511 634 aa18.49■□□□□ 0.55
USP39-218ENST00000493829 AKTIPQ9H8T0 292 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms