RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FAM49BQ9NUQ9 324 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 PANK4Q9NVE7 773 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 DPP3Q9NY33 737 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 RBAKQ9NYW8 714 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-218ENST00000493430 DLGAP2Q9P1A6 1054 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 HCN3Q9P1Z3 774 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 GTF3C4Q9UKN8 822 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 CDH7Q9ULB5 785 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 NCOR2Q9Y618 2525 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 DCHS1Q96JQ0 3298 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 WDR87Q6ZQQ6 2873 aa2.93□□□□□ -1.94
PTCD3-218ENST00000493430 CFAP54Q96N23 3096 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CACNA1BQ00975 2339 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 IGF2RP11717 2491 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 FRMD3A2A2Y4 597 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 LRRIQ3A6PVS8 624 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM189-UBE2V1I3L0A0 370 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SPINT2O43291 252 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SEC14L5O43304 696 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CRLF1O75462 422 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 EGFP01133 1207 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 PIGRP01833 764 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CLTAP09496 248 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SP9P0CG40 484 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 PNMA6AP0CW24 399 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ZNF23P17027 643 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CYP3A5P20815 502 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 BDNFP23560 247 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ADORA2BP29275 332 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 LONP1P36776 959 aaKnown RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 GRK6P43250 576 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 FASLGP48023 281 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 NDUFA8P51970 172 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 GTF2BQ00403 316 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CSTF1Q05048 431 aaKnown RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 LRMPQ12912 555 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 PDIA5Q14554 519 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SF3A2Q15428 464 aaKnown RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 NFIL3Q16649 462 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 TMEM95Q3KNT9 176 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 HSP90AA4PQ58FG1 418 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 RESP18Q5W5W9 173 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 FRG2Q64ET8 278 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CENPPQ6IPU0 288 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SLC8B1Q6J4K2 584 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ARMCX5Q6P1M9 558 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ZNF704Q6ZNC4 412 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 RRM2BQ7LG56 351 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ZNF720Q7Z2F6 126 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 DNAJB7Q7Z6W7 309 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ARID3BQ8IVW6 561 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 APLFQ8IW19 511 aaPredicted RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 HSCBQ8IWL3 235 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 HACE1Q8IYU2 909 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ADGRF2Q8IZF7 708 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SYCP3Q8IZU3 236 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ADSSL1Q8N142 457 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 GPD1LQ8N335 351 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 C12orf29Q8N999 325 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 OR5R1Q8NH85 324 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CCT6BQ92526 530 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SEMA4DQ92854 862 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 TBC1D20Q96BZ9 403 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ORAI1Q96D31 301 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 RMDN1Q96DB5 314 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SLC41A2Q96JW4 573 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 NECTIN4Q96NY8 510 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 KCNK16Q96T55 309 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SYT15Q9BQS2 421 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 DCTN5Q9BTE1 182 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 H2AFJQ9BTM1 129 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 INTS2Q9H0H0 1204 aaKnown RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 LTB4R2Q9NPC1 389 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ACP6Q9NPH0 428 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SLC52A3Q9NQ40 469 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ITM2CQ9NQX7 267 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 EPS15L1Q9UBC2 864 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 HSPB7Q9UBY9 170 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ACSL5Q9ULC5 683 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 ODF2LQ9ULJ1 636 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 UBQLN1Q9UMX0 589 aaKnown RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 C2CD2Q9Y426 696 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.92□□□□□ -1.94
PTCD3-218ENST00000493430 SLCO1B1Q9Y6L6 691 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 PIAS3Q9Y6X2 628 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 USP24Q9UPU5 2620 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CHD8Q9HCK8 2581 aa2.92□□□□□ -1.94
PTCD3-218ENST00000493430 CACNA1AO00555 2505 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 FER1L5A0AVI2 2057 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 DNAH14Q0VDD8 3507 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 UNC13CQ8NB66 2214 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ZCWPW2A0A1B0GU75 182 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 ARHGEF37A1IGU5 675 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 F8VP50 259 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 TAF4O00268 1085 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 LAD1O00515 517 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 TRDMT1O14717 391 aaKnown RBP2.91□□□□□ -1.94
PTCD3-218ENST00000493430 CIDEAO60543 219 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 CTSVO60911 334 aa2.91□□□□□ -1.94
PTCD3-218ENST00000493430 TCEA3O75764 348 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms