RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 NXNL1Q96CM4 212 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MTBPQ96DY7 904 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MMABQ96EY8 250 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SEC16BQ96JE7 1060 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 VPS50Q96JG6 964 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 CD244Q9BZW8 370 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SEMA4CQ9C0C4 833 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 PITHD1Q9GZP4 211 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLC25A18Q9H1K4 315 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 EHD1Q9H4M9 534 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MKKSQ9NPJ1 570 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 ACSS2Q9NR19 701 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 C14orf105Q9NVL8 296 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 COPG2Q9UBF2 871 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 CTSFQ9UBX1 484 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZFP69BQ9UJL9 534 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MAP4K5Q9Y4K4 846 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLC22A7Q9Y694 548 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 MAU2Q9Y6X3 613 aa10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 FLNBO75369 2602 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-206ENST00000492796 A0A0A6YYC8 382 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ARGFXA6NJG6 315 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 TRIM49D1C9J1S8 452 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 MKRN2OSH3BPM6 223 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 I3L1I5 382 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 PEX12O00623 359 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 PCDH17O14917 1159 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 CLGNO14967 610 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 H2AFYO75367 372 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 C1QL1O75973 258 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SNRPAP09012 282 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZGLP1P0C6A0 271 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 C1GALT1C1LP0DN25 315 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 COL6A2P12110 1019 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 MMP11P24347 488 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 GMPRP36959 345 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 GLRBP48167 497 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 C19orf57Q0VDD7 668 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ATP1A4Q13733 1029 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLC29A2Q14542 456 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 HERC3Q15034 1050 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 PDK4Q16654 411 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 C18orf21Q32NC0 220 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ADGRD1Q6QNK2 874 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLCO4C1Q6ZQN7 724 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 GSPT2Q8IYD1 628 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 KRT78Q8N1N4 520 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ZNF843Q8N446 348 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 AMER3Q8N944 861 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SNX31Q8N9S9 440 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 TRPV3Q8NET8 790 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 TTLQ8NG68 377 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 C9orf43Q8TAL5 461 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 STT3BQ8TCJ2 826 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 MIEF2Q96C03 454 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 WDR34Q96EX3 536 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 FER1L6-AS2Q96M78 137 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 EFCAB11Q9BUY7 163 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 TGIF2Q9GZN2 237 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ING2Q9H160 280 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 VPS11Q9H270 941 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SPNS1Q9H2V7 528 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SOX17Q9H6I2 414 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 NT5DC2Q9H857 520 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 ANKHQ9HCJ1 492 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SEMA3GQ9NS98 782 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 TRPC4Q9UBN4 977 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 SEC16AO15027 2179 aa10.12□□□□□ -0.79
CDC42SE1-206ENST00000492796 PCSK5Q92824 1860 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 IQANK1A0A1B0GTG1 560 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 URADA6NGE7 173 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 ESPNB1AK53 854 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 K7EPI3 171 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 AGPSO00116 658 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 UBXN8O00124 270 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 KLK8O60259 260 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CCNT2O60583 730 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLU7O95391 586 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 STATHP02808 62 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 PRB1P04280 392 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CYC1P08574 325 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 RBP1P09455 135 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 MYBL2P10244 700 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 MTHFD2P13995 350 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 GFAPP14136 432 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 IL1RNP18510 177 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 VARSP26640 1264 aaKnown RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 GCAP28676 217 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 HPDP32754 393 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 KCNC1P48547 511 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 KLC1Q07866 573 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 LAPTM5Q13571 262 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 SLBPQ14493 270 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 NAA30Q147X3 362 aaPredicted RBP10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 FBXO48Q5FWF7 155 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 TECRLQ5HYJ1 363 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 CPZQ66K79 652 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 TCTN3Q6NUS6 607 aa10.11□□□□□ -0.79
CDC42SE1-206ENST00000492796 METTL2BQ6P1Q9 378 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms