RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 ACTR10Q9NZ32 417 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 CTSFQ9UBX1 484 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SIX4Q9UIU6 781 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 PURGQ9UJV8 347 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 ABCG2Q9UNQ0 655 aa9.39□□□□□ -0.91
VPS8-225ENST00000492449 SAMD4AQ9UPU9 718 aaKnown RBP9.39□□□□□ -0.91
VPS8-225ENST00000492449 TRBV5-3A0A0A0MS03 114 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 TRAV20A0A0B4J274 112 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 GLYATL1P3A0A0U1RQE8 302 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 GNB5O14775 395 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 SYN3O14994 580 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 CYP17A1P05093 508 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 HSMCR30P0CW71 290 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 CKMT1AP12532 417 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 MTHFD2P13995 350 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 CD1DP15813 335 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 PURAQ00577 322 aaKnown RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 PDZD4Q76G19 769 aaPredicted RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 SLC51AQ86UW1 340 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 LRRTM3Q86VH5 581 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 NETO1Q8TDF5 533 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 APOL2Q9BQE5 337 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 C1QTNF3Q9BXJ4 246 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 SNTG1Q9NSN8 517 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 LSM2Q9Y333 95 aaKnown RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 SRCAPQ6ZRS2 3230 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 PSIP1O75475 530 aaKnown RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 PIPP12273 146 aaPredicted RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 KDELC2Q7Z4H8 507 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 SCUBE3Q8IX30 993 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 MSRB3Q8IXL7 192 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 ADGRF3Q8IZF5 1079 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 UBE2J2Q8N2K1 259 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 TMEM132CQ8N3T6 1108 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 TMEM145Q8NBT3 493 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 DNAJB8Q8NHS0 232 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 SLC35F5Q8WV83 523 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 SLC13A3Q8WWT9 602 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 NSUN5Q96P11 429 aaKnown RBP9.38□□□□□ -0.91
VPS8-225ENST00000492449 PIP5K1AQ99755 562 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 IKZF5Q9H5V7 419 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 ZNF226Q9NYT6 803 aa9.38□□□□□ -0.91
VPS8-225ENST00000492449 SH3D21A4FU49 640 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SNAPC5O75971 98 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 IFNA4P05014 189 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 FABP1P07148 127 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 NPR1P16066 1061 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SYN1P17600 705 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SLC6A1P30531 599 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 ZNF81P51508 661 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 ATP12AP54707 1039 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 ITGA1P56199 1179 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 PPP3R1P63098 170 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 CSTF1Q05048 431 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 CSTF3Q12996 717 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 CAMK2DQ13557 499 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 APOBEC3HQ6NTF7 200 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 XRRA1Q6P2D8 792 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 KRT74Q7RTS7 529 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 KIAA0907Q7Z7F0 614 aaPredicted RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 MCATQ8IVS2 390 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 Q8N402 240 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 ATG16L2Q8NAA4 619 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 BVESQ8NE79 360 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 ATP6V1C2Q8NEY4 427 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SETD7Q8WTS6 366 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 CELF6Q96J87 481 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 ARL5BQ96KC2 179 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 GFM1Q96RP9 751 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 EPYCQ99645 322 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 GPR63Q9BZJ6 419 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 NMUR1Q9HB89 426 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 C1orf109Q9NX04 203 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 NDUFB11Q9NX14 153 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 COPZ2Q9P299 210 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 PCDHGA9Q9Y5G4 932 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 BTAF1O14981 1849 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 AIPO00170 330 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 CCNDBP1O95273 360 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SIX3O95343 332 aaPredicted RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 PRAMEF1O95521 474 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 VIPP01282 170 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 RPL34P49207 117 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 AKR1D1P51857 326 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 FGL1Q08830 312 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 PGM5Q15124 567 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 GOLGA7BQ2TAP0 167 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SYPL2Q5VXT5 272 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 SLC34A3Q8N130 599 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 PCNPQ8WW12 178 aaKnown RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 ZNF419Q96HQ0 510 aaPredicted RBP9.37□□□□□ -0.91
VPS8-225ENST00000492449 ATOH8Q96SQ7 321 aa9.37□□□□□ -0.91
VPS8-225ENST00000492449 TBL1YQ9BQ87 522 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms