RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 ABCF3Q9NUQ8 709 aa13.62□□□□□ -0.23
SSR4-212ENST00000491833 LRFN1Q9P244 771 aa13.62□□□□□ -0.23
SSR4-212ENST00000491833 ASB1Q9Y576 335 aa13.62□□□□□ -0.23
SSR4-212ENST00000491833 H3BMM5 538 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 SMAPO00193 183 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 NME2P1O60361 137 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 NIPSNAP2O75323 286 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 SLC25A12O75746 678 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 IFNB1P01574 187 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 STATHP02808 62 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 IGFBP2P18065 325 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 IL1RNP18510 177 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 NME2P22392 152 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 STIP1P31948 543 aaKnown RBP13.61□□□□□ -0.23
SSR4-212ENST00000491833 SNRPNP63162 240 aaKnown RBP13.61□□□□□ -0.23
SSR4-212ENST00000491833 MAPKAPK3Q16644 382 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 PCID2Q5JVF3 399 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 PRSS41Q7RTY9 318 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 CD163Q86VB7 1156 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 CPSF7Q8N684 471 aaKnown RBP13.61□□□□□ -0.23
SSR4-212ENST00000491833 PPFIBP2Q8ND30 876 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 ASB5Q8WWX0 329 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 ZNF592Q92610 1267 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 FAM136AQ96C01 138 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 CAPZA3Q96KX2 299 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 BIRC8Q96P09 236 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 PKP4Q99569 1192 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 HOMER3Q9NSC5 361 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 TNFRSF10DQ9UBN6 386 aa13.61□□□□□ -0.23
SSR4-212ENST00000491833 FAM90A27PA6NNH2 459 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 CDK2AP1O14519 115 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 TFECO14948 347 aaPredicted RBP13.6□□□□□ -0.23
SSR4-212ENST00000491833 PFDN6O15212 129 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 SLC16A8O95907 504 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 TPOP07202 933 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 APRTP07741 180 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 CD99P14209 185 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 FMO4P31512 558 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 PTGER1P34995 402 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 PAFAH1B1P43034 410 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 ETF1P62495 437 aaKnown RBP13.6□□□□□ -0.23
SSR4-212ENST00000491833 SNX1Q13596 522 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
SSR4-212ENST00000491833 ABRAXAS2Q15018 415 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 KLHL38Q2WGJ6 581 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 SFT2D3Q587I9 215 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
SSR4-212ENST00000491833 THEMIS2Q5TEJ8 643 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 SYT10Q6XYQ8 523 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 FGD2Q7Z6J4 655 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 CCDC89Q8N998 374 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 FAM57AQ8TBR7 257 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 ZNF480Q8WV37 535 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 ATG4AQ8WYN0 398 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 OLFM1Q99784 485 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 ZNF559Q9BR84 538 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 RAB6BQ9NRW1 208 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 TREX1Q9NSU2 369 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 ZNF148Q9UQR1 794 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 SAR1BQ9Y6B6 198 aa13.6□□□□□ -0.23
SSR4-212ENST00000491833 OR2W5A6NFC9 320 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 E5RI56 91 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 E7ENX8 843 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 SGK494L7N484 410 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 CES2O00748 559 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 NDC80O14777 642 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 ESR1P03372 595 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 CHRM3P20309 590 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 MSX1P28360 303 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 CHRNB4P30926 498 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 PTGS2P35354 604 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 BCL6P41182 706 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 SESN2P58004 480 aaPredicted RBP13.59□□□□□ -0.23
SSR4-212ENST00000491833 SLC26A5P58743 744 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 RPS15AP62244 130 aaKnown RBP13.59□□□□□ -0.23
SSR4-212ENST00000491833 TAP2Q03519 686 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 ACTN3Q08043 901 aaPredicted RBP13.59□□□□□ -0.23
SSR4-212ENST00000491833 NSDHLQ15738 373 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 RNFT1Q5M7Z0 435 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 TMEM211Q6ICI0 200 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 MRNIPQ6NTE8 343 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 VN1R4Q7Z5H5 301 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 SDCCAG8Q86SQ7 713 aaPredicted RBP13.59□□□□□ -0.23
SSR4-212ENST00000491833 POGLUT1Q8NBL1 392 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 ZCCHC10Q8TBK6 192 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 LPGAT1Q92604 370 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 TMEM125Q96AQ2 219 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 TMUB1Q9BVT8 246 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 CDCP1Q9H5V8 836 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 ANKHQ9HCJ1 492 aa13.59□□□□□ -0.23
SSR4-212ENST00000491833 NPDC1Q9NQX5 325 aaPredicted RBP13.59□□□□□ -0.23
SSR4-212ENST00000491833 GTF3C1Q12789 2109 aa13.58□□□□□ -0.23
SSR4-212ENST00000491833 TCRBV7S2A1N4TA0A589 114 aa13.58□□□□□ -0.24
SSR4-212ENST00000491833 FAM221AA4D161 298 aa13.58□□□□□ -0.24
SSR4-212ENST00000491833 NKX2-6A6NCS4 301 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms