RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SAMD4BQ5PRF9 694 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 SNAP47Q5SQN1 464 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 WDR74Q6RFH5 385 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ZBTB49Q6ZSB9 765 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CHSY3Q70JA7 882 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CILP2Q8IUL8 1156 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CNTN4Q8IWV2 1026 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 RBM12BQ8IXT5 1001 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 MYO1HQ8N1T3 1032 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 AVL9Q8NBF6 648 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 WDR36Q8NI36 951 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 NXNL1Q96CM4 212 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 SLC46A1Q96NT5 459 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 SLC25A23Q9BV35 468 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CRYL1Q9Y2S2 319 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 LOXL2Q9Y4K0 774 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 A0A087X1B8 175 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 FAM95CA0A1B0GW59 222 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM8BA6NDV4 472 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PRORSD1PA6NEY8 169 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 TMEM233B4DJY2 109 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 QSOX1O00391 747 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 UBDO15205 165 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ZW10O43264 779 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 GPC4O75487 556 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 BMP10O95393 424 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 SNRPB2P08579 225 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CCL4P13236 92 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PAMP19021 973 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 OGNP20774 298 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 RPS3P23396 243 aaKnown RBP eCLIP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ATP5F1P24539 256 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 AOAHP28039 575 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 LEPRP48357 1165 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PPM1FP49593 454 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 SLC12A2P55011 1212 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 RPA4Q13156 261 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CLPPQ16740 277 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 REP15Q6BDI9 236 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 MRNIPQ6NTE8 343 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 DHRS4L2Q6PKH6 230 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 FBXO39Q8N4B4 442 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ABTB1Q969K4 478 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 FERD3LQ96RJ6 166 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CIB1Q99828 191 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 OLAHQ9NV23 265 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 TUBA8Q9NY65 449 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 CCDC167Q9P0B6 97 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 KLHL3Q9UH77 587 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PTBP2Q9UKA9 531 aaKnown RBP9.06□□□□□ -0.96
BRCA1-219ENST00000491747 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 PCDHGA8Q9Y5G5 932 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 ZZEF1O43149 2961 aa9.06□□□□□ -0.96
BRCA1-219ENST00000491747 USP24Q9UPU5 2620 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF701M0R085 212 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PLD2O14939 933 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 NIPSNAP2O75323 286 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 DXOO77932 396 aaKnown RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TNFSF15O95150 251 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 C9P02748 559 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 GSTM1P09488 218 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 AMD1P17707 334 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 GABRB3P28472 473 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 SLC1A2P43004 574 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CD151P48509 253 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 MPP1Q00013 466 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 GSTM4Q03013 218 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 KCTD21Q4G0X4 260 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 AGKQ53H12 422 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF470Q6ECI4 717 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PTRHD1Q6GMV3 140 aaKnown RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 FAM45BPQ6NSW5 357 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 ZNF549Q6P9A3 640 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 GPR141Q7Z602 305 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PDZD3Q86UT5 571 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 OR5AR1Q8NGP9 310 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 FNDC8Q8TC99 324 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 FAM45AQ8TCE6 357 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TFGQ92734 400 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PMEPA1Q969W9 287 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 GPR78Q96P69 363 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TCF12Q99081 682 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 STRADBQ9C0K7 418 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 KIR3DX1Q9H7L2 352 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 NOL11Q9H8H0 719 aaKnown RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 MEAF6Q9HAF1 191 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 OCIAD1Q9NX40 245 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CROTQ9UKG9 612 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 MN1Q10571 1320 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 A0A087WXM4 84 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CDRT15L2A8MXV6 281 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 TMX2-CTNND1H3BSU7 103 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 MRASO14807 208 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 HNRNPCP07910 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
BRCA1-219ENST00000491747 BMP2P12643 396 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 CAPZBP47756 277 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 HSPA14Q0VDF9 509 aa9.05□□□□□ -0.96
BRCA1-219ENST00000491747 PRKG2Q13237 762 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms