RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ADRA2CP18825 462 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 CYP2A7P20853 494 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 TNNT3P45378 269 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 OR3A2P47893 321 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 TWISTNBQ3B726 338 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 CES4AQ5XG92 561 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 TRAT1Q6PIZ9 186 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 GALNTL5Q7Z4T8 443 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 SPATA19Q7Z5L4 167 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 ERC1Q8IUD2 1116 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 OR4D10Q8NGI6 311 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 MGARPQ8TDB4 240 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 EXOC4Q96A65 974 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 BSCL2Q96G97 398 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 NSMCE3Q96MG7 304 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 GDAP1L1Q96MZ0 367 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 NDNQ99608 321 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 CITED2Q99967 270 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 PIGQQ9BRB3 760 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 NACAP1Q9BZK3 213 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 HOXD1Q9GZZ0 328 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 B3GAT2Q9NPZ5 323 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 HACD3Q9P035 362 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 NPHP3Q7Z494 1330 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 FLRT2O43155 660 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRAF2O60831 178 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 YES1P07947 543 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM58BPP0C7Q3 252 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 IFNAR1P17181 557 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 SSTR1P30872 391 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 KIF5BP33176 963 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 SOAT1P35610 550 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 SOX3P41225 446 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 CSNK2BP67870 215 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 NECTIN1Q15223 517 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 TAB1Q15750 504 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 LBHQ53QV2 105 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRSS55Q6UWB4 352 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 RPAINQ86UA6 219 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 KLHL7Q8IXQ5 586 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRSS35Q8N3Z0 413 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 DEPDC1BQ8WUY9 529 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 SNX21Q969T3 373 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 ST6GALNAC6Q969X2 333 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM162AQ96A26 154 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZNF689Q96CS4 500 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 MOCOSQ96EN8 888 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 C18orf12Q96KH6 178 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 JAKMIP1Q96N16 626 aaKnown RBP4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 THUMPD3Q9BV44 507 aaKnown RBP4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 WWTR1Q9GZV5 400 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 EGLN3Q9H6Z9 239 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 RAVER2Q9HCJ3 691 aaKnown RBP4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 PDRG1Q9NUG6 133 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 MTRRQ9UBK8 725 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 LNPEPQ9UIQ6 1025 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 GMEB2Q9UKD1 530 aa4.18□□□□□ -1.74
HMGB1P38-201ENST00000490557 GPRASP1Q5JY77 1395 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 A0A1B0GU03 582 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 NTN3O00634 580 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CPLX1O14810 134 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 HTATSF1O43719 755 aaKnown RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CYTIPO60759 359 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 FCGR3BO75015 233 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 IGHDP01880 384 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CDX1P47902 265 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CLDN17P56750 224 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 BPIFB3P59826 476 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 SCARB2Q14108 478 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 FASTKD3Q14CZ7 662 aaKnown RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CDO1Q16878 200 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 TXNRD3NBQ6F5E7 133 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 OR4C11Q6IEV9 310 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 FBXL22Q6P050 247 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 METTL7BQ6UX53 244 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 KIF6Q6ZMV9 814 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 MACC1Q6ZN28 852 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 TMEM182Q6ZP80 229 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 Q6ZRP5 223 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CCDC91Q7Z6B0 441 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 TEX9Q8N6V9 391 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 OR8H1Q8NGG4 311 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 NCOA7Q8NI08 942 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 CHURC1Q8WUH1 139 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 ERO1AQ96HE7 468 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 C2orf48Q96LS8 159 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 INTS14Q96SY0 518 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 EGLN1Q9GZT9 426 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 MTHFD2LQ9H903 347 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 RPF1Q9H9Y2 349 aaKnown RBP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 EXOC1Q9NV70 894 aa4.17□□□□□ -1.74
HMGB1P38-201ENST00000490557 MYH14Q7Z406 1995 aaKnown RBP4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 TRAV18A0A075B6X5 111 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 A8MVM7 634 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 E5RGE8 158 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 PSMA7O14818 248 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 SURF4O15260 269 aa4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 SORBS2O94875 1100 aaKnown RBP4.16□□□□□ -1.74
HMGB1P38-201ENST00000490557 TBX6O95947 436 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms