RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 UBE2R2Q712K3 238 aaPredicted RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 CEP97Q8IW35 865 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 CTAGE3PQ8IX95 158 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 PARP9Q8IXQ6 854 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 CSNK1A1LQ8N752 337 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 PPM1NQ8N819 430 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 SUN3Q8TAQ9 357 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 MRRFQ96E11 262 aaKnown RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 THAP11Q96EK4 314 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 CNDP1Q96KN2 507 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 DRC3Q9H069 523 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 RUBCNLQ9H714 662 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 NSMCE4AQ9NXX6 385 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 NINJ2Q9NZG7 142 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 TRPC4Q9UBN4 977 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 MTRF1LQ9UGC7 380 aaKnown RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 ERRFI1Q9UJM3 462 aaPredicted RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 ADAMTS6Q9UKP5 1117 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 NFU1Q9UMS0 254 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 MRPS2Q9Y399 296 aaKnown RBP9.85□□□□□ -0.83
TTC28-207ENST00000490475 MAU2Q9Y6X3 613 aa9.85□□□□□ -0.83
TTC28-207ENST00000490475 SPENQ96T58 3664 aaKnown RBP9.84□□□□□ -0.83
TTC28-207ENST00000490475 LOC105369274A0A096LPK9 316 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 LOC102723532A0A0G2JNH3 316 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 IDSB3KWA1 339 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 WFS1O76024 890 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 SYF2O95926 243 aaKnown RBP9.84□□□□□ -0.83
TTC28-207ENST00000490475 HEXBP07686 556 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 CCND1P24385 295 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 SLC26A3P40879 764 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 AVPR1BP47901 424 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 RGS4P49798 205 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 IL2P60568 153 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 SKP1P63208 163 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 YBX1P67809 324 aaKnown RBP9.84□□□□□ -0.83
TTC28-207ENST00000490475 ARG2P78540 354 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 ZNF460Q14592 562 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 EFTUD2Q15029 972 aaKnown RBP eCLIP9.84□□□□□ -0.83
TTC28-207ENST00000490475 THEMIS2Q5TEJ8 643 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 ZNF425Q6IV72 752 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 FAM45BPQ6NSW5 357 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 NIPAL1Q6NVV3 410 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 FBXO42Q6P3S6 717 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 PAQR7Q86WK9 346 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 IFT20Q8IY31 132 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 OR4N4Q8N0Y3 316 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 PPFIBP2Q8ND30 876 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 FAM45AQ8TCE6 357 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 GRHL3Q8TE85 626 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.84□□□□□ -0.83
TTC28-207ENST00000490475 METTL21AQ8WXB1 218 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 CDKL2Q92772 493 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 HAS2Q92819 552 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 MMABQ96EY8 250 aaPredicted RBP9.84□□□□□ -0.83
TTC28-207ENST00000490475 LINGO1Q96FE5 620 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 VPS39Q96JC1 886 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 CPNE1Q99829 537 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 ACAT2Q9BWD1 397 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 YIPF2Q9BWQ6 316 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 RNF32Q9H0A6 362 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 RHOJQ9H4E5 214 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 CAB39LQ9H9S4 337 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 ZNF160Q9HCG1 818 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 OLAHQ9NV23 265 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 C19orf25Q9UFG5 118 aaPredicted RBP9.84□□□□□ -0.83
TTC28-207ENST00000490475 TAC3Q9UHF0 121 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 IKZF3Q9UKT9 509 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 PDE10AQ9Y233 779 aa9.84□□□□□ -0.83
TTC28-207ENST00000490475 ITPR2Q14571 2701 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 LOC102723996A0A087X1L8 192 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 PABPN1LA6NDY0 278 aaKnown RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 ENO4A6NNW6 628 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 E7ENX8 843 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 H0YIG0 161 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 CDK2AP1O14519 115 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 ACSL3O95573 720 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 MLYCDO95822 493 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 SLC16A8O95907 504 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 CRYABP02511 175 aaKnown RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 PRR35P0CG20 571 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 IL10P22301 178 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 STX2P32856 288 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 GRK3P35626 688 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 RPS15AP62244 130 aaKnown RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 TAP2Q03519 686 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 TSTA3Q13630 321 aaPredicted RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 GRTP1Q5TC63 336 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 WDR93Q6P2C0 686 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 MTFR2Q6P444 385 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 SUSD1Q6UWL2 747 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 SHISA6Q6ZSJ9 500 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 HDXQ7Z353 690 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 ADCK2Q7Z695 626 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 RELL1Q8IUW5 271 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 MYO1HQ8N1T3 1032 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 SPATA6LQ8N4H0 392 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 METTL27Q8N6F8 245 aaPredicted RBP9.83□□□□□ -0.84
TTC28-207ENST00000490475 DNAJB8Q8NHS0 232 aa9.83□□□□□ -0.84
TTC28-207ENST00000490475 UHMK1Q8TAS1 419 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms