RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 ZNF304Q9HCX3 659 aa8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 TREX1Q9NSU2 369 aa8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 CDYLQ9Y232 598 aa8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 B3GNT3Q9Y2A9 372 aa8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 COMMD10Q9Y6G5 202 aa8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 MDC1Q14676 2089 aaKnown RBP8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 RP1L1Q8IWN7 2480 aaPredicted RBP8.45□□□□□ -1.06
TNRC6B-208ENST00000489500 A0A0U1RQJ8 604 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 HYKKA2RU49 373 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SDR42E2A6NKP2 422 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 ZBTB14O43829 449 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 KLF7O75840 302 aaPredicted RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 DDAH2O95865 285 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 KRT14P02533 472 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 ANXA5P08758 320 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 MLNP12872 115 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 ENO3P13929 434 aaPredicted RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 MMP11P24347 488 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 GABRA4P48169 554 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SOX8P57073 446 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 VSX2P58304 361 aaPredicted RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 CRADDP78560 199 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 ABATP80404 500 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 TSTA3Q13630 321 aaPredicted RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 DHX34Q14147 1143 aaKnown RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SEMA3AQ14563 771 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SLC9A5Q14940 896 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 ARHGAP19Q14CB8 494 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 NDUFA9Q16795 377 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 TUBB8Q3ZCM7 444 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 WASHC2DQ5SRD0 308 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 AGAP7PQ5VUJ5 663 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 NEK10Q6ZWH5 1172 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 PRUNE1Q86TP1 453 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 VRK3Q8IV63 474 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 LRRC8AQ8IWT6 810 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 LINC01555Q8NAE3 123 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 OR9A1PQ8NGU1 263 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 FLVCR1-AS1Q8TAF5 88 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SMPDL3AQ92484 453 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 MAGOHBQ96A72 148 aaKnown RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 CABS1Q96KC9 395 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 AGAP4Q96P64 663 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 IL17FQ96PD4 163 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SLC26A1Q9H2B4 701 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 MRPS30Q9NP92 439 aaKnown RBP8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 SYBUQ9NX95 663 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 KLHL42Q9P2K6 505 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 CRYL1Q9Y2S2 319 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 JRKLQ9Y4A0 524 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 NBASA2RRP1 2371 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 DOCK10Q96BY6 2186 aa8.44□□□□□ -1.06
TNRC6B-208ENST00000489500 A0A0J9YVX5 310 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 FAM237BA0A1B0GVD1 139 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MAP2K7O14733 419 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 ZSCAN12O43309 604 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 USP1O94782 785 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 SORBS2O94875 1100 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 SYF2O95926 243 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 ONECUT2O95948 504 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 EIF2S1P05198 315 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 TPBGLP0DKB5 382 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 HOXA5P20719 270 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 FBLP22087 321 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 FDXRP22570 491 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 GNLYP22749 145 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 HRH2P25021 359 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 PEBP1P30086 187 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 GRIA3P42263 894 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 BDKRB1P46663 353 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 KCNJ1P48048 391 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 GLRBP48167 497 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 VPS41P49754 854 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 SRSF3P84103 164 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 RAPSNQ13702 412 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 PTK6Q13882 451 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 SIX1Q15475 284 aaPredicted RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 TYSND1Q2T9J0 566 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 THEMIS2Q5TEJ8 643 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 NEPROQ6NW34 567 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 IGFL3Q6UXB1 125 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 PCGF5Q86SE9 256 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MCUQ8NE86 351 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 OR2L3Q8NG85 312 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 LKAAEAR1Q8TD35 194 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MCOLN3Q8TDD5 553 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MIEF2Q96C03 454 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MFSD3Q96ES6 412 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MVB12AQ96EY5 273 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 C20orf173Q96LM9 149 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 ZFYVE21Q9BQ24 234 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 FAM167BQ9BTA0 163 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 CRB3Q9BUF7 120 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MARCH4Q9P2E8 410 aaPredicted RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 ZNF282Q9UDV7 671 aaPredicted RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 CIDEBQ9UHD4 219 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 COPG1Q9Y678 874 aaKnown RBP8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 MAD1L1Q9Y6D9 718 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 BOD1L1Q8NFC6 3051 aa8.43□□□□□ -1.06
TNRC6B-208ENST00000489500 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms