RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 DLGAP3O95886 979 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 PIM1P11309 404 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 PCNAP12004 261 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 CREB1P16220 341 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 HNF4AP41235 474 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 CASP2P42575 452 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 NAA20P61599 178 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 CYP4F2P78329 520 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 ABHD18Q0P651 414 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 HKDC1Q2TB90 917 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 MANEAQ5SRI9 462 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF678Q5SXM1 525 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 GARNL3Q5VVW2 1013 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 BROXQ5VW32 411 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 TTC19Q6DKK2 380 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 MED27Q6P2C8 311 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 TIPARPQ7Z3E1 657 aaKnown RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 MILR1Q7Z6M3 343 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 PROKR1Q8TCW9 393 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 TRPC4APQ8TEL6 797 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 REPS1Q96D71 796 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 PKNOX2Q96KN3 472 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 DPH2Q9BQC3 489 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 SARGQ9BW04 601 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 SPNS1Q9H2V7 528 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 NT5DC2Q9H857 520 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 VIPAS39Q9H9C1 493 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 SSU72Q9NP77 194 aaKnown RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 LHX9Q9NQ69 397 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 SLC17A7Q9P2U7 560 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 COPG2Q9UBF2 871 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 DHCR7Q9UBM7 475 aaKnown RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 RUVBL1Q9Y265 456 aaKnown RBP15.01□□□□□ -0.01
C9orf3-219ENST00000488186 ZFHX4Q86UP3 3567 aa15.01□□□□□ -0.01
C9orf3-219ENST00000488186 ADAMTS20P59510 1910 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 SDK2Q58EX2 2172 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 A0A1B0GX78 115 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 H3BMH7 237 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 DSCR3O14972 297 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 UGDHO60701 494 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 MLYCDO95822 493 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 OTCP00480 354 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 RPS17P08708 135 aaKnown RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 NEFHP12036 1026 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 EPORP19235 508 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 GSTM2P28161 218 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 HPDP32754 393 aaPredicted RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 EMP3P54852 163 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 CDH13P55290 713 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 MAGOHP61326 146 aaKnown RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 PHEXP78562 749 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 DCDP81605 110 aaKnown RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 CLCQ05315 142 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 GPS2Q13227 327 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 PWP1Q13610 501 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 COL9A2Q14055 689 aaPredicted RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 TGIF1Q15583 401 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 PRTGQ2VWP7 1150 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 LIPMQ5VYY2 423 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 GRHL2Q6ISB3 625 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 RPS27LQ71UM5 84 aaKnown RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 DTX1Q86Y01 620 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 DSELQ8IZU8 1212 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 SLC38A9Q8NBW4 561 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 ZNF483Q8TF39 744 aaPredicted RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 NKD1Q969G9 470 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 WDR34Q96EX3 536 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 MAGEB10Q96LZ2 347 aaPredicted RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 LRFN5Q96NI6 719 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 NSUN5Q96P11 429 aaKnown RBP15□□□□□ -0.01
C9orf3-219ENST00000488186 TMEM237Q96Q45 408 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 MACROD1Q9BQ69 325 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 C17orf62Q9BQA9 187 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 EFHD1Q9BUP0 239 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 C1QTNF3Q9BXJ4 246 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 SPRY4Q9C004 299 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 OXSMQ9NWU1 459 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 CDC14AQ9UNH5 594 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 STK38LQ9Y2H1 464 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 PCDHGA11Q9Y5H2 935 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 HEATR5BQ9P2D3 2071 aa15□□□□□ -0.01
C9orf3-219ENST00000488186 C9J4A7 227 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 OR7A17O14581 309 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TYROBPO43914 113 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TRIM13O60858 407 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 WFS1O76024 890 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 ZWINTO95229 277 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TSPAN8P19075 237 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TCN2P20062 427 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 AVPR1BP47901 424 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 NAGLUP54802 743 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 DNAJB13P59910 316 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 RPS15P62841 145 aaKnown RBP14.99□□□□□ -0.01
C9orf3-219ENST00000488186 PCDH1Q08174 1060 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 CLN3Q13286 438 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 CPSF6Q16630 551 aaKnown RBP eCLIP14.99□□□□□ -0.01
C9orf3-219ENST00000488186 UNC50Q53HI1 259 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 TNFAIP8L3Q5GJ75 292 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 AGBL2Q5U5Z8 902 aa14.99□□□□□ -0.01
C9orf3-219ENST00000488186 MLIPQ5VWP3 458 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms