RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 METTL21AQ8WXB1 218 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 PSMF1Q92530 271 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SNF8Q96H20 258 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 KRT12Q99456 494 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SGPP1Q9BX95 441 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 TGIF2Q9GZN2 237 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 VN1R1Q9GZP7 353 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 PCBD2Q9H0N5 130 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 ANKHQ9HCJ1 492 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 AGPAT4Q9NRZ5 378 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SNX24Q9Y343 169 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 PSAT1Q9Y617 370 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 SAR1BQ9Y6B6 198 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 TEX264Q9Y6I9 313 aa10.7□□□□□ -0.7
NIPAL3-207ENST00000488155 CACNA1CQ13936 2221 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 FREM3P0C091 2139 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 DYTNA2CJ06 578 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 EFCAB8A8MWE9 144 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 OR1F1O43749 312 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 CDC123O75794 336 aaPredicted RBP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 PIAS1O75925 651 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 SEC24DO94855 1032 aaPredicted RBP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 NSA2O95478 260 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 SERPINA7P05543 415 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 C8orf89P0DMQ9 161 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 FDXRP22570 491 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 HRH2P25021 359 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 COL8A1P27658 744 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 PAFAH1B1P43034 410 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TSFMP43897 325 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 ARL4CP56559 192 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 OLR1P78380 273 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TLR1Q15399 786 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 CATSPEREQ5SY80 951 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 FAM45BPQ6NSW5 357 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TMEM214Q6NUQ4 689 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TMEM205Q6UW68 189 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TMEM207Q6UWW9 146 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 PDSS2Q86YH6 399 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 MFSD9Q8NBP5 474 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF740Q8NDX6 193 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 FBXO36Q8NEA4 188 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 OR5T3Q8NGG3 340 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 FAM45AQ8TCE6 357 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 MOCOSQ96EN8 888 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 PEX11GQ96HA9 241 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TSNARE1Q96NA8 513 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 OR4K3Q96R72 315 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 LMF1Q96S06 567 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 TRIM54Q9BYV2 358 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 UNKQ9C0B0 810 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 SPNS1Q9H2V7 528 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 RIC8BQ9NVN3 520 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 NOTCH2Q04721 2471 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 PKDREJQ9NTG1 2253 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 ZNF407Q9C0G0 2248 aa10.69□□□□□ -0.7
NIPAL3-207ENST00000488155 KCNE1BA0A087WTH5 132 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 LOC102723996A0A087X1L8 192 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 NPEPPSL1A6NEC2 478 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 A8MUI8 341 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 H0YIG0 161 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 CDC7O00311 574 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 NDUFS4O43181 175 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 DNAJB6O75190 326 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 SEC31AO94979 1220 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 CCND1P24385 295 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 SOX11P35716 441 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 HNF4AP41235 474 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 RPL21P46778 160 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 CCR8P51685 355 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 MGAT5Q09328 741 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 STEAP4Q687X5 459 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 DUPD1Q68J44 220 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 FCRLBQ6BAA4 426 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 SYDE1Q6ZW31 735 aaPredicted RBP10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 CPEB2Q7Z5Q1 589 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 OR56A3Q8NH54 315 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 FAR1Q8WVX9 515 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 TM4SF19Q96DZ7 209 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 C5orf34Q96MH7 638 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 CYTH2Q99418 400 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 HAUS8Q9BT25 410 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 DPH5Q9H2P9 285 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 ZFATQ9P243 1243 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 NAALAD2Q9Y3Q0 740 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 NINQ8N4C6 2090 aa10.68□□□□□ -0.7
NIPAL3-207ENST00000488155 DOPEY1Q5JWR5 2465 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 FAM95CA0A1B0GW59 222 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 CTAGE15A4D2H0 777 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 CCDC188H7C350 402 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 FANCGO15287 622 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 TP73O15350 636 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 WDPCPO95876 746 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 SLC35G6P0C7Q6 338 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 AP1S2P56377 157 aa10.67□□□□□ -0.7
NIPAL3-207ENST00000488155 TAS2R39P59534 338 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms