RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 JAKMIP1Q96N16 626 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF396Q96N95 335 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 ALS2CR12Q96Q35 445 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 FNBP1Q96RU3 617 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 CPNE1Q99829 537 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 BPIFA3Q9BQP9 254 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 THUMPD3Q9BV44 507 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 MRPL9Q9BYD2 267 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 PRRG4Q9BZD6 226 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 TRIM7Q9C029 511 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 XPO4Q9C0E2 1151 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 DBNDD1Q9H9R9 158 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SNX7Q9UNH6 387 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 DISP3Q9P2K9 1392 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 MAGI3Q5TCQ9 1506 aa3.49□□□□□ -1.85
ECHDC1-217ENST00000488087 SH3TC1Q8TE82 1336 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 KIAA1210Q9ULL0 1709 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 HECW2Q9P2P5 1572 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 PTCH1Q13635 1447 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 TRAV34A0A0B4J273 112 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 HTR3EA5X5Y0 456 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 GOLGA6L10A6NI86 522 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ENO4A6NNW6 628 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 USP27XA6NNY8 438 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ZSCAN12O43309 604 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 MGRN1O60291 552 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CFC1BP0CG36 223 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CFC1P0CG37 223 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 IRF2P14316 349 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 SYT1P21579 422 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 GCKP35557 465 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 GLIPR1P48060 266 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 POLR2LP62875 67 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 RIPK1Q13546 671 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 VEZF1Q14119 521 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 P2RY6Q15077 328 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 UGT3A2Q3SY77 523 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CMPK2Q5EBM0 449 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 SPDYCQ5MJ68 293 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CEP85LQ5SZL2 805 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 SPOUT1Q5T280 376 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 FAM53AQ6NSI3 398 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ARHGAP11AQ6P4F7 1023 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF790Q6PG37 636 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 TRAT1Q6PIZ9 186 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CWC27Q6UX04 472 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 MSANTD1Q6ZTZ1 278 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ABI3BPQ7Z7G0 1075 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 LUZP1Q86V48 1076 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 LGI2Q8N0V4 545 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ARL10Q8N8L6 244 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF248Q8NDW4 579 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CNNM3Q8NE01 707 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 FAM76AQ8TAV0 307 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 AFAP1L1Q8TED9 768 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 C17orf50Q8WW18 174 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 SUSD6Q92537 303 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CCDC47Q96A33 483 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 PARD6BQ9BYG5 372 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 FN3KQ9H479 309 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CLSTN2Q9H4D0 955 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 ZNF696Q9H7X3 374 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 VCPKMTQ9H867 229 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 TRPV4Q9HBA0 871 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CDH20Q9HBT6 801 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 FAM207AQ9NSI2 230 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 INTS9Q9NV88 658 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 UTP6Q9NYH9 597 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 VPS18Q9P253 973 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 STUB1Q9UNE7 303 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 TRIM17Q9Y577 477 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 GMEB1Q9Y692 573 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 POMT1Q9Y6A1 747 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 CROCC2H7BZ55 1655 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 MYOM1P52179 1685 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 SHPRHQ149N8 1683 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 NESP48681 1621 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 USP32Q8NFA0 1604 aa3.48□□□□□ -1.85
ECHDC1-217ENST00000488087 IQGAP1P46940 1657 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 H0Y626 953 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 RTCAO00442 366 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 EIF3HO15372 352 aaKnown RBP eCLIP3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 KRT86O43790 486 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 EDIL3O43854 480 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 LUC7L3O95232 432 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 GOSR1O95249 250 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 EML2O95834 649 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 EPB41P11171 864 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 IDO1P14902 403 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 PDGFRAP16234 1089 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 CD22P20273 847 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 ACAT1P24752 427 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 PTGER4P35408 488 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 KRT2P35908 639 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 HSD17B3P37058 310 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 WNT5AP41221 380 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 CD86P42081 329 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 MAGEA11P43364 429 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 CCNG1P51959 295 aa3.47□□□□□ -1.85
ECHDC1-217ENST00000488087 NAGLUP54802 743 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms