RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 NDNQ99608 321 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 MGME1Q9BQP7 344 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 GPR88Q9GZN0 384 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 NOL11Q9H8H0 719 aaKnown RBP2.99□□□□□ -1.93
SMC4-219ENST00000487747 CNOT10Q9H9A5 744 aaKnown RBP2.99□□□□□ -1.93
SMC4-219ENST00000487747 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.99□□□□□ -1.93
SMC4-219ENST00000487747 GSN-AS1Q9NRJ2 163 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 PCDHGB4Q9UN71 923 aa2.99□□□□□ -1.93
SMC4-219ENST00000487747 FSD2A1L4K1 749 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 E9PAM4 449 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 F8VVB4 439 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 F8VWA3 439 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 SPRY1O43609 319 aaPredicted RBP2.98□□□□□ -1.93
SMC4-219ENST00000487747 DUTP33316 252 aaKnown RBP2.98□□□□□ -1.93
SMC4-219ENST00000487747 SRPXP78539 464 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 EPS8Q12929 822 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 CHAF1BQ13112 559 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 ZNF79Q15937 498 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 RPAINQ86UA6 219 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 TEKT4Q8WW24 435 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 ITLN1Q8WWA0 313 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 PROX1Q92786 737 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 BADQ92934 168 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 TSACCQ96A04 125 aaPredicted RBP2.98□□□□□ -1.93
SMC4-219ENST00000487747 NSUN4Q96CB9 384 aaKnown RBP2.98□□□□□ -1.93
SMC4-219ENST00000487747 NXPE2Q96DL1 559 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 RSRC1Q96IZ7 334 aaKnown RBP2.98□□□□□ -1.93
SMC4-219ENST00000487747 DGAT2Q96PD7 388 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 LRRCC1Q9C099 1032 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 ZNF69Q9UC07 566 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 IL17BQ9UHF5 180 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 VPS28Q9UK41 221 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 POGZQ7Z3K3 1410 aa2.98□□□□□ -1.93
SMC4-219ENST00000487747 GLOD5A6NK44 160 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 TXNL1O43396 289 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 RPS6KA5O75582 802 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 SERPING1P05155 500 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 GIG44P09565 113 aaPredicted RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 SAGP10523 405 aaPredicted RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 PKLRP30613 574 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 GPR183P32249 361 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 CETN2P41208 172 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 EIF2DP41214 584 aaKnown RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 BTG1P62324 171 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 IL11RAQ14626 422 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 WTAPQ15007 396 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 KHDRBS2Q5VWX1 349 aaKnown RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 HIPK1Q86Z02 1210 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 RPAP2Q8IXW5 612 aaPredicted RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 MAML2Q8IZL2 1156 aaPredicted RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 TAGAPQ8N103 731 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 OR9Q2Q8NGE9 314 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 OTUB1Q96FW1 271 aaPredicted RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 TIGD1Q96MW7 591 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 MUS81Q96NY9 551 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 HNRNPABQ99729 332 aaKnown RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 KLK11Q9UBX7 282 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 DDX25Q9UHL0 483 aaKnown RBP2.97□□□□□ -1.93
SMC4-219ENST00000487747 PILRBQ9UKJ0 227 aa2.97□□□□□ -1.93
SMC4-219ENST00000487747 TRAV24A0A0B4J272 114 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 RNF103O00237 685 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 ATP5BP06576 529 aaKnown RBP2.96□□□□□ -1.94
SMC4-219ENST00000487747 ADORA3P0DMS8 318 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 PORP16435 677 aaPredicted RBP2.96□□□□□ -1.94
SMC4-219ENST00000487747 C4BPBP20851 252 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 ASCL1P50553 236 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 MLF2Q15773 248 aaPredicted RBP2.96□□□□□ -1.94
SMC4-219ENST00000487747 TMEM44Q2T9K0 475 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 ZBTB49Q6ZSB9 765 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 C5orf24Q7Z6I8 188 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 HSCBQ8IWL3 235 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 SLC4A11Q8NBS3 891 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 TSPAN14Q8NG11 270 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 OR4C15Q8NGM1 316 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 GCNAQ96QF7 691 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 TREX2Q9BQ50 279 aaPredicted RBP2.96□□□□□ -1.94
SMC4-219ENST00000487747 SDF4Q9BRK5 362 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 MRPL1Q9BYD6 325 aaKnown RBP2.96□□□□□ -1.94
SMC4-219ENST00000487747 BLOC1S4Q9NUP1 217 aa2.96□□□□□ -1.94
SMC4-219ENST00000487747 MRPL15Q9P015 296 aaKnown RBP2.96□□□□□ -1.94
SMC4-219ENST00000487747 TRGV8A0A0C4DH27 118 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 A0A1B0GTH9 108 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 hCG_38984A0A1B0GV85 526 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 FAM220BPB1ANY3 271 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 CDX4O14627 284 aaPredicted RBP2.95□□□□□ -1.94
SMC4-219ENST00000487747 AP5Z1O43299 807 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 MTRF1O75570 445 aaKnown RBP2.95□□□□□ -1.94
SMC4-219ENST00000487747 TSPAN9O75954 239 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 PGM3O95394 542 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 SEMA4FO95754 770 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 MT-ND1P03886 318 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 CD59P13987 128 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 ELK3P41970 407 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 UBASH3AP57075 661 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 UBXN2AP68543 259 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 CYLC2Q14093 348 aaPredicted RBP2.95□□□□□ -1.94
SMC4-219ENST00000487747 CAMKMTQ7Z624 323 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 DNAAF5Q86Y56 855 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 AVL9Q8NBF6 648 aa2.95□□□□□ -1.94
SMC4-219ENST00000487747 NABP1Q96AH0 204 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms