RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SIX1Q15475 284 aaPredicted RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 Q1RN00 199 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 C9orf66Q5T8R8 295 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 C6orf163Q5TEZ5 329 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 CYB5D1Q6P9G0 228 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 PRSS55Q6UWB4 352 aaPredicted RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 DET1Q7L5Y6 550 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 C11orf42Q8N5U0 333 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 OR9Q2Q8NGE9 314 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 OR4C15Q8NGM1 316 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 FEVQ99581 238 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 BARD1Q99728 777 aaKnown RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 CPNE1Q99829 537 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 SDF4Q9BRK5 362 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 PI4K2AQ9BTU6 479 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 BLOC1S4Q9NUP1 217 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 CLEC5AQ9NY25 188 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 CPSF2Q9P2I0 782 aaKnown RBP2.91□□□□□ -1.94
CCDC66-221ENST00000487739 TMEM5Q9Y2B1 443 aa2.91□□□□□ -1.94
CCDC66-221ENST00000487739 hCG_38984A0A1B0GV85 526 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 RNF103O00237 685 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 C4BPBP20851 252 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 PCGF2P35227 344 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 ELK3P41970 407 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 LIG4P49917 911 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 CLNS1AP54105 237 aaKnown RBP2.9□□□□□ -1.95
CCDC66-221ENST00000487739 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 PPIAP62937 165 aaKnown RBP2.9□□□□□ -1.95
CCDC66-221ENST00000487739 CUL4AQ13619 759 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 PTPRCAPQ14761 206 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 DUSP5Q16690 384 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 VWC2Q2TAL6 325 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 FAM205BPQ63HN1 556 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 CCDC60Q8IWA6 550 aaPredicted RBP2.9□□□□□ -1.95
CCDC66-221ENST00000487739 SYT2Q8N9I0 419 aaPredicted RBP2.9□□□□□ -1.95
CCDC66-221ENST00000487739 AVL9Q8NBF6 648 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 OR4Q3Q8NH05 313 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 TEKT4Q8WW24 435 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 DGAT2Q96PD7 388 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 MGME1Q9BQP7 344 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 LRRCC1Q9C099 1032 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 ACTL8Q9H568 366 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 RAVER2Q9HCJ3 691 aaKnown RBP2.9□□□□□ -1.95
CCDC66-221ENST00000487739 PDE7BQ9NP56 450 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 KLK11Q9UBX7 282 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 MRPS18CQ9Y3D5 142 aaKnown RBP2.9□□□□□ -1.95
CCDC66-221ENST00000487739 IL16Q14005 1332 aa2.9□□□□□ -1.95
CCDC66-221ENST00000487739 SRRM4A7MD48 611 aaKnown RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 SAP30O75446 220 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 ATP5BP06576 529 aaKnown RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 ABCB1P08183 1280 aaPredicted RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 FAM200BP0CF97 657 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 SFTPDP35247 375 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 POLR2LP62875 67 aaKnown RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 ILF2Q12905 390 aaKnown RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 STK4Q13043 487 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 CAMKMTQ7Z624 323 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 SERINC5Q86VE9 423 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 ROBO4Q8WZ75 1007 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 C11orf52Q96A22 123 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 MUS81Q96NY9 551 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 CCDC106Q9BWC9 280 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 YTHDF1Q9BYJ9 559 aaKnown RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 UBA5Q9GZZ9 404 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 CNOT10Q9H9A5 744 aaKnown RBP2.89□□□□□ -1.95
CCDC66-221ENST00000487739 PILRBQ9UKJ0 227 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 AUP1Q9Y679 476 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 RNF123Q5XPI4 1314 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 ARID2Q68CP9 1835 aa2.89□□□□□ -1.95
CCDC66-221ENST00000487739 RSF1Q96T23 1441 aaPredicted RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 IGHV3-16A0A0C4DH30 117 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 A0A1B0GTH9 108 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 A0A1W2PQ72 361 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 NKX6-3A6NJ46 265 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 FAM220BPB1ANY3 271 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 CLDN4O14493 209 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 GSRP00390 522 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 ANPEPP15144 967 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 PORP16435 677 aaPredicted RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 EEF1B2P24534 225 aaKnown RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 GSK3BP49841 420 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 ABCE1P61221 599 aaKnown RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 IL11RAQ14626 422 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 MAPRE1Q15691 268 aaKnown RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 MLF2Q15773 248 aaPredicted RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 LEMD1Q68G75 181 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 ZBTB49Q6ZSB9 765 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 CPEB2Q7Z5Q1 589 aaKnown RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 CARM1Q86X55 608 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 ZC3H3Q8IXZ2 948 aaKnown RBP2.88□□□□□ -1.95
CCDC66-221ENST00000487739 CASP10Q92851 521 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 RADILQ96JH8 1075 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 GCNAQ96QF7 691 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 TAAR6Q96RI8 345 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 ABHD1Q96SE0 405 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 STRADBQ9C0K7 418 aa2.88□□□□□ -1.95
CCDC66-221ENST00000487739 MOB1AQ9H8S9 216 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms