RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 GALNT3Q14435 633 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ASIC2Q16515 512 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF658BQ4V348 819 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 BCL7AQ4VC05 210 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ALS2CLQ60I27 953 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 SLC9A4Q6AI14 798 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 RHBDD2Q6NTF9 364 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 RPUSD3Q6P087 351 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 Q6ZPA2 131 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 FAM83HQ6ZRV2 1179 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF572Q7Z3I7 529 aaPredicted RBP4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 CUZD1Q86UP6 607 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 SRRM1Q8IYB3 904 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 TTC30BQ8N4P2 665 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ZADH2Q8N4Q0 377 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 PLD5Q8N7P1 536 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 CLEC1AQ8NC01 280 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ACVR1CQ8NER5 493 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 OR2Y1Q8NGV0 311 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 OR2L2Q8NH16 312 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 OR1L3Q8NH93 324 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 PROKR1Q8TCW9 393 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 PTERQ96BW5 349 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 TTC25Q96NG3 672 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 GBP5Q96PP8 586 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 RNF157Q96PX1 679 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 CCM2Q9BSQ5 444 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 GPR63Q9BZJ6 419 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 TFB2MQ9H5Q4 396 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 BCO1Q9HAY6 547 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 HACD3Q9P035 362 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 LUZP4Q9P127 313 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 SERTAD3Q9UJW9 196 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 ANAPC7Q9UJX3 599 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 NENFQ9UMX5 172 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 SHOC2Q9UQ13 582 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 TTLL3Q9Y4R7 772 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 HEBP2Q9Y5Z4 205 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 AP1M2Q9Y6Q5 423 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 COLEC10Q9Y6Z7 277 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 CROCCQ5TZA2 2017 aa4.9□□□□□ -1.63
R3HDM1-218ENST00000487294 PKDREJQ9NTG1 2253 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 GLYATL1P3A0A0U1RQE8 302 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 OR6C74A6NCV1 312 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 A6NL46 340 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CXorf49A8MYA2 514 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 C9J4A7 227 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 E7EQ34 232 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 AGPSO00116 658 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PEX12O00623 359 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF749O43361 778 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PROSCO94903 275 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PIRTP0C851 137 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 KRT4P19013 534 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CYP2A7P20853 494 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CDK11BP21127 795 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ECHS1P30084 290 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CA5AP35218 305 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 SPAM1P38567 509 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 GABRA4P48169 554 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ARCN1P48444 511 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CD151P48509 253 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 TAS2R40P59535 323 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 NHLH2Q02577 135 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 KLHL30Q0D2K2 578 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PRKAA1Q13131 559 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 AIMP2Q13155 320 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 XRCC4Q13426 336 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 NFE2L1Q14494 772 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PDK1Q15118 436 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 NOMO1Q15155 1222 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 TEX44Q53QW1 395 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 GPRC6AQ5T6X5 926 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PRAMEF17Q5VTA0 474 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 FAM69BQ5VUD6 431 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 MBNL2Q5VZF2 373 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF324BQ6AW86 544 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 SP5Q6BEB4 398 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CCDC70Q6NSX1 233 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ARMC6Q6NXE6 501 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 TMEM220Q6QAJ8 160 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 KDELC1Q6UW63 502 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 FAM180AQ6UWF9 173 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PPP1R32Q7Z5V6 425 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ZGRF1Q86YA3 2104 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 LDLRAD3Q86YD5 345 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ULK2Q8IYT8 1036 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 KCTD6Q8NC69 237 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 CCNYQ8ND76 341 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 OR10H5Q8NGA6 315 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 FAR1Q8WVX9 515 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 RNF31Q96EP0 1072 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 TEKT5Q96M29 485 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 PPM1MQ96MI6 270 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 ZNF830Q96NB3 372 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 TRAPPC9Q96Q05 1148 aa4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 DCLRE1CQ96SD1 692 aaKnown RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 WDR77Q9BQA1 342 aaPredicted RBP4.89□□□□□ -1.63
R3HDM1-218ENST00000487294 BPIFA3Q9BQP9 254 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms