RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FAM149AA5PLN7 773 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 ANTXRLA6NF34 631 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 DDX39AO00148 427 aaKnown RBP4.06□□□□□ -1.76
SMC4-218ENST00000486711 CCL24O00175 119 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 SCO2O43819 266 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 CDC123O75794 336 aaPredicted RBP4.06□□□□□ -1.76
SMC4-218ENST00000486711 KRT33AO76009 404 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 PNPP00491 289 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 YES1P07947 543 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 ERVK-10P10266 1014 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 ATP6V1E1P36543 226 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 CDKN1AP38936 164 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 CASP3P42574 277 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 OR3A3P47888 321 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 LINC01547P58512 204 aaPredicted RBP4.06□□□□□ -1.76
SMC4-218ENST00000486711 ARF5P84085 180 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 ARHGAP1Q07960 439 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 ABRQ12979 859 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 TEAD2Q15562 447 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 TMEM207Q6UWW9 146 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 NHLRC1Q6VVB1 395 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 SLC24A5Q71RS6 500 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 KLHDC8BQ8IXV7 354 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 AMER3Q8N944 861 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 GPATCH11Q8N954 259 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 LRTM2Q8N967 370 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 TMEM178AQ8NBL3 297 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 LPCAT1Q8NF37 534 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 CABS1Q96KC9 395 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 LPAR4Q99677 370 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 NKX3-1Q99801 234 aaPredicted RBP4.06□□□□□ -1.76
SMC4-218ENST00000486711 ALKBH7Q9BT30 221 aaPredicted RBP4.06□□□□□ -1.76
SMC4-218ENST00000486711 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 MID1IP1Q9NPA3 183 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 SCRT2Q9NQ03 307 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 EXOC1Q9NV70 894 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 TMOD3Q9NYL9 352 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 SPG21Q9NZD8 308 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 FBXW2Q9UKT8 454 aa4.06□□□□□ -1.76
SMC4-218ENST00000486711 SMIM30A4D0T7 59 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 KINO60870 393 aaKnown RBP4.05□□□□□ -1.76
SMC4-218ENST00000486711 GPIP06744 558 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 PRSS56P0CW18 603 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 SLC2A2P11168 524 aaPredicted RBP4.05□□□□□ -1.76
SMC4-218ENST00000486711 VCLP18206 1134 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 CHRNB4P30926 498 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 SERPINB6P35237 376 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 MAP2K2P36507 400 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 OR3A1P47881 315 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 TAF6P49848 677 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 ATP12AP54707 1039 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 NME5P56597 212 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 KIAA1024LP59773 190 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 RPA4Q13156 261 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 PPA1Q15181 289 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 ACKR1Q16570 336 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 SLC39A12Q504Y0 691 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 IFI44LQ53G44 452 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 ZNF542PQ5EBM4 170 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 PM20D1Q6GTS8 502 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 ZNF790Q6PG37 636 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 FCRLAQ7L513 359 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 AQP12AQ8IXF9 295 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 KLHDC8AQ8IYD2 350 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 LSMEM2Q8N112 164 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 FAM89BQ8N5H3 189 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 OR2T11Q8NH01 316 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 ARHGAP45Q92619 1136 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 RBM41Q96IZ5 413 aaKnown RBP4.05□□□□□ -1.76
SMC4-218ENST00000486711 ACAT2Q9BWD1 397 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 NYXQ9GZU5 481 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 THAP2Q9H0W7 228 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 NAPBQ9H115 298 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 DPEP2Q9H4A9 486 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 DBNDD1Q9H9R9 158 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 GPR173Q9NS66 373 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 PRDM4Q9UKN5 801 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 NCKAP1Q9Y2A7 1128 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 KNSTRNQ9Y448 316 aa4.05□□□□□ -1.76
SMC4-218ENST00000486711 SNED1Q8TER0 1413 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 PFASO15067 1338 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 IGHV4-4A0A075B6R2 117 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 SNURFLB1AK76 121 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 CACNB4O00305 520 aaPredicted RBP4.04□□□□□ -1.76
SMC4-218ENST00000486711 PGRMC2O15173 223 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 KERAO60938 352 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 GRAP2O75791 330 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 AP2A2O94973 939 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 SBK2P0C263 348 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 FAM157CP0CG43 387 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 DLATP10515 647 aaKnown RBP4.04□□□□□ -1.76
SMC4-218ENST00000486711 TIMP3P35625 211 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 RPP38P78345 283 aaKnown RBP4.04□□□□□ -1.76
SMC4-218ENST00000486711 SLC34A1Q06495 639 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 C17orf67Q0P5P2 114 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 MAPK11Q15759 364 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 CDC37Q16543 378 aaPredicted RBP4.04□□□□□ -1.76
SMC4-218ENST00000486711 ZNF74Q16587 644 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 ARMCX4Q5H9R4 360 aa4.04□□□□□ -1.76
SMC4-218ENST00000486711 KLHL10Q6JEL2 608 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms