RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 NEK2P51955 445 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 INHBCP55103 352 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 HSD11B2P80365 405 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 C16orf72Q14CZ0 275 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 RTP5Q14D33 572 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 HIST2H2ACQ16777 129 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 DEFB110Q30KQ9 67 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 GGTA1PQ4G0N0 100 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 SGO1Q5FBB7 561 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 PAGE2BQ5JRK9 111 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 HIST2H2AA3Q6FI13 130 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 FRMPD2BQ6IN97 320 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 MED27Q6P2C8 311 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 PCSK4Q6UW60 755 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 SCIMPQ6UWF3 145 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 TMIGD1Q6UXZ0 262 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 FAM47EQ6ZV65 393 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 RNF44Q7L0R7 432 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 VN1R5Q7Z5H4 357 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 MCATQ8IVS2 390 aaKnown RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 LAS2Q8IYD9 372 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 OR4N4Q8N0Y3 316 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 D2HGDHQ8N465 521 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 MFSD9Q8NBP5 474 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 OR7G3Q8NG95 312 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 WDR20Q8TBZ3 569 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 OR2A5Q96R48 311 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 UBL7Q96S82 380 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 SARGQ9BW04 601 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 CHRNA10Q9GZZ6 450 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 PDE7BQ9NP56 450 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 FARSBQ9NSD9 589 aaKnown RBP12.22□□□□□ -0.45
HDAC6-229ENST00000486665 SOHLH2Q9NX45 425 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 BTRCQ9Y297 605 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 FIS1Q9Y3D6 152 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 AK5Q9Y6K8 562 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 UNC13CQ8NB66 2214 aa12.22□□□□□ -0.45
HDAC6-229ENST00000486665 EIF4E1BA6NMX2 242 aaKnown RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 H0YGG7 62 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 CRCPO75575 148 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 TBX6O95947 436 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 KITP10721 976 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 UROSP10746 265 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 PCNAP12004 261 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 EZRP15311 586 aaKnown RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 GRK3P35626 688 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 ARL4DP49703 201 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 RPL14P50914 215 aaKnown RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 ARF3P61204 181 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 RELAQ04206 551 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 TRA2AQ13595 282 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 NAA25Q14CX7 972 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 KANK2Q63ZY3 851 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 VN1R4Q7Z5H5 301 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 KMT5CQ86Y97 462 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 LRRC34Q8IZ02 419 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 CREB3L4Q8TEY5 395 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 SLC39A7Q92504 469 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 MAGEB10Q96LZ2 347 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 C7orf26Q96N11 449 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 ZNF317Q96PQ6 595 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 ZFYVE21Q9BQ24 234 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 MACROD1Q9BQ69 325 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 SLC29A3Q9BZD2 475 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 RHBGQ9H310 441 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 TUBB1Q9H4B7 451 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 MARCOQ9UEW3 520 aaPredicted RBP12.21□□□□□ -0.45
HDAC6-229ENST00000486665 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 PCDHGA11Q9Y5H2 935 aa12.21□□□□□ -0.45
HDAC6-229ENST00000486665 SNRNP200O75643 2136 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 EDF1O60869 148 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 CSO75390 466 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 SNUPNO95149 360 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 PDYNP01213 254 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 CDK4P11802 303 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 HMOX2P30519 316 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 CCKBRP32239 447 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 LSP1P33241 339 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 MLLT3P42568 568 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 RPS15AP62244 130 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 GNGT1P63211 74 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 CYP4F2P78329 520 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 DDX39BQ13838 428 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 GPR19Q15760 415 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 ISXQ2M1V0 245 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 FRG2Q64ET8 278 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 CRLF3Q8IUI8 442 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 HUS1BQ8NHY5 278 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 SNIP1Q8TAD8 396 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
HDAC6-229ENST00000486665 USP7Q93009 1102 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 UBE2E3Q969T4 207 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 TM4SF19Q96DZ7 209 aa12.2□□□□□ -0.46
HDAC6-229ENST00000486665 TMEM74Q96NL1 305 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms