RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 OR4F6Q8NGB9 312 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 SLC13A3Q8WWT9 602 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 SREK1Q8WXA9 508 aaKnown RBP19■□□□□ 0.63
COL6A2-208ENST00000485591 LRFN5Q96NI6 719 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 CDK15Q96Q40 435 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 NDC1Q9BTX1 674 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 GATA5Q9BWX5 397 aaPredicted RBP19■□□□□ 0.63
COL6A2-208ENST00000485591 RHBGQ9H310 441 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 CCDC86Q9H6F5 360 aaKnown RBP19■□□□□ 0.63
COL6A2-208ENST00000485591 ZNF490Q9ULM2 529 aaPredicted RBP19■□□□□ 0.63
COL6A2-208ENST00000485591 RUVBL1Q9Y265 456 aaKnown RBP19■□□□□ 0.63
COL6A2-208ENST00000485591 RNF11Q9Y3C5 154 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 FER1L5A0AVI2 2057 aa19■□□□□ 0.63
COL6A2-208ENST00000485591 HYKKA2RU49 373 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 H0YIV9 168 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 PPP6CO00743 305 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 BIRC5O15392 142 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 NDUFS4O43181 175 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 ATP8B1O43520 1251 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 NTRK1P04629 796 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 CAPNS1P04632 268 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 FAM214AQ32MH5 1076 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 MANEAQ5SRI9 462 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 GARNL3Q5VVW2 1013 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 UNQ6494/PRO21346Q6UXR6 183 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 MILR1Q7Z6M3 343 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 ZFAND4Q86XD8 727 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 ARHGEF39Q8N4T4 335 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 ANKRD42Q8N9B4 389 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 SLC38A9Q8NBW4 561 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 NT5CQ8TCD5 201 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 CLIP3Q96DZ5 547 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 SLC7A5P2Q9GIP4 190 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 DRC3Q9H069 523 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 CUTCQ9NTM9 273 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 TRPS1Q9UHF7 1281 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 TSC22D4Q9Y3Q8 395 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 PCDHGA11Q9Y5H2 935 aa18.99■□□□□ 0.63
COL6A2-208ENST00000485591 A0A1B0GTL3 188 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 H3BQF6 201 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 DYNC1I1O14576 645 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 CLEC3AO75596 197 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 STATHP02808 62 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 SERPINB1P30740 379 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 RORAP35398 523 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 PKNOX1P55347 436 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 PCBP4P57723 403 aaKnown RBP18.98■□□□□ 0.63
COL6A2-208ENST00000485591 CYP4F2P78329 520 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 RGS1Q08116 209 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 LETMD1Q6P1Q0 360 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 GPRIN3Q6ZVF9 776 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 VN1R5Q7Z5H4 357 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 OR7G3Q8NG95 312 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 SNIP1Q8TAD8 396 aaKnown RBP18.98■□□□□ 0.63
COL6A2-208ENST00000485591 PROKR1Q8TCW9 393 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 CREB3L4Q8TEY5 395 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 AGAP11Q8TF27 550 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 FGF11Q92914 225 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 REPS1Q96D71 796 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 RNF31Q96EP0 1072 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 C10orf90Q96M02 699 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 TRMOQ9BU70 441 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 TXLNGQ9NUQ3 528 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 NKIRAS1Q9NYS0 192 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 ZNF225Q9UK10 706 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 AKAP13Q12802 2813 aa18.98■□□□□ 0.63
COL6A2-208ENST00000485591 A0A1B0GX78 115 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 ANKDD1BA6NHY2 528 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 C1QTNF9BB2RNN3 333 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 DSCR3O14972 297 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 NPHS1O60500 1241 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 OR4F21O95013 312 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 SERPINA6P08185 405 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 C1QTNF9P0C862 333 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 LIPCP11150 499 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 GPS2Q13227 327 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 CPSF6Q16630 551 aaKnown RBP eCLIP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 MUM1Q2TAK8 710 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 ZNF385CQ66K41 422 aaPredicted RBP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 ADNP2Q6IQ32 1131 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 TMEM214Q6NUQ4 689 aaKnown RBP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 C6orf15Q6UXA7 325 aaPredicted RBP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 TIPARPQ7Z3E1 657 aaKnown RBP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 SYVN1Q86TM6 617 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 DTX1Q86Y01 620 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 NUDCD3Q8IVD9 361 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 NLGN4XQ8N0W4 816 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 GALNT6Q8NCL4 622 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 NLGN4YQ8NFZ3 816 aaPredicted RBP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 OR6Y1Q8NGX8 325 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 CNDP1Q96KN2 507 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 MACROD1Q9BQ69 325 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 SLC6A16Q9GZN6 736 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 MLXIPLQ9NP71 852 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 DHCR7Q9UBM7 475 aaKnown RBP18.97■□□□□ 0.63
COL6A2-208ENST00000485591 ADGRE2Q9UHX3 823 aa18.97■□□□□ 0.63
COL6A2-208ENST00000485591 TEX51A0A1B0GUA7 166 aa18.96■□□□□ 0.63
COL6A2-208ENST00000485591 UBFD1O14562 309 aaKnown RBP18.96■□□□□ 0.63
COL6A2-208ENST00000485591 TLX3O43711 291 aaPredicted RBP18.96■□□□□ 0.63
COL6A2-208ENST00000485591 RAD1O60671 282 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms