RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PCBD2Q9H0N5 130 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 KCNK13Q9HB14 408 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 ANKHQ9HCJ1 492 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 SH3BGRL2Q9UJC5 107 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 PPP2R2CQ9Y2T4 447 aa18.15■□□□□ 0.5
COL27A1-205ENST00000485397 CRYBG3Q68DQ2 2970 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 CCL21O00585 134 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 CYC1P08574 325 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 MYBL2P10244 700 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 CDH1P12830 882 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 GABRB3P28472 473 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 ACER2Q5QJU3 275 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 RBM20Q5T481 1227 aaKnown RBP18.14■□□□□ 0.49
COL27A1-205ENST00000485397 UGT3A1Q6NUS8 523 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 H3F3CQ6NXT2 135 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 PAQR3Q6TCH7 311 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 C2CD4AQ8NCU7 369 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-205ENST00000485397 SLC13A3Q8WWT9 602 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 PBKQ96KB5 322 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 ZNF354BQ96LW1 612 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 NPAS2Q99743 824 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 PARVBQ9HBI1 364 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 ANKRD10Q9NXR5 420 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 SUCOQ9UBS9 1254 aaKnown RBP18.14■□□□□ 0.49
COL27A1-205ENST00000485397 SCN2AQ99250 2005 aa18.14■□□□□ 0.49
COL27A1-205ENST00000485397 ZNF860A6NHJ4 632 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 MAN1A2O60476 641 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 CDC123O75794 336 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-205ENST00000485397 C8GP07360 202 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 CA7P43166 264 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 RGS4P49798 205 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 AGTR2P50052 363 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 CDKN2DP55273 166 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 ART3Q13508 389 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 PHKG1Q16816 387 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 ZXDCQ2QGD7 858 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-205ENST00000485397 CAPN13Q6MZZ7 669 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-205ENST00000485397 LRRC8EQ6NSJ5 796 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 LCTLQ6UWM7 567 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 CRLF3Q8IUI8 442 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 PALM2Q8IXS6 379 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 MYO1HQ8N1T3 1032 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 MFSD9Q8NBP5 474 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 OR5T3Q8NGG3 340 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 TSLPQ969D9 159 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 PEX11GQ96HA9 241 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 SIGLEC12Q96PQ1 595 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 SGPP1Q9BX95 441 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 HES7Q9BYE0 225 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 NAALAD2Q9Y3Q0 740 aa18.13■□□□□ 0.49
COL27A1-205ENST00000485397 SLC16A5O15375 505 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 DNAJB6O75190 326 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 BANF1O75531 89 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 NPPBP16860 134 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 PGAM1P18669 254 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 CD96P40200 585 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 PGGT1BP53609 377 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 MEF2AQ02078 507 aaPredicted RBP18.12■□□□□ 0.49
COL27A1-205ENST00000485397 RHAGQ02094 409 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 SP140Q13342 867 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 TUBA3CQ13748 450 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 CRYMQ14894 314 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 SFT2D3Q587I9 215 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 RNASEH2BQ5TBB1 312 aaKnown RBP18.12■□□□□ 0.49
COL27A1-205ENST00000485397 TUBA3EQ6PEY2 450 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 PAPD4Q6PIY7 484 aaKnown RBP18.12■□□□□ 0.49
COL27A1-205ENST00000485397 PCGF5Q86SE9 256 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 MRGPRGQ86SM5 289 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 MCEMP1Q8IX19 187 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 PPIL6Q8IXY8 311 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 PLPP5Q8NEB5 264 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 M1APQ8TC57 530 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 MOCOSQ96EN8 888 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 LINGO1Q96FE5 620 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 KLHL1Q9NR64 748 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 TAS2R13Q9NYV9 303 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 JRKLQ9Y4A0 524 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 SLC22A7Q9Y694 548 aa18.12■□□□□ 0.49
COL27A1-205ENST00000485397 GRK3P35626 688 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 RBPJQ06330 500 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 ACTN3Q08043 901 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-205ENST00000485397 DHX9Q08211 1270 aaKnown RBP18.11■□□□□ 0.49
COL27A1-205ENST00000485397 NAA30Q147X3 362 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-205ENST00000485397 ABRAXAS2Q15018 415 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 NSDHLQ15738 373 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 EXT1Q16394 746 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 MEP1AQ16819 746 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 SPINK14Q6IE38 97 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 MDS2Q8NDY4 140 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 PYCR2Q96C36 320 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 MMP25Q9NPA2 562 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 LANCL2Q9NS86 450 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 SLC17A6Q9P2U8 582 aa18.11■□□□□ 0.49
COL27A1-205ENST00000485397 KLF2Q9Y5W3 355 aaPredicted RBP18.11■□□□□ 0.49
COL27A1-205ENST00000485397 FAM227AF5H4B4 570 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 PGRMC1O00264 195 aaKnown RBP18.1■□□□□ 0.49
COL27A1-205ENST00000485397 TTI1O43156 1089 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 B3GALT4O96024 378 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 AHSGP02765 367 aa18.1■□□□□ 0.49
COL27A1-205ENST00000485397 HIST1H2AGP0C0S8 130 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms