RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 CSE1LP55060 971 aaKnown RBP2.47□□□□□ -2.01
VPS50-216ENST00000484954 BTG1P62324 171 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 RBPJQ06330 500 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 PTGISQ16647 500 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 TMEM266Q2M3C6 531 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 ENOSF1Q7L5Y1 443 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 ANKRD33Q7Z3H0 272 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 TLK2Q86UE8 772 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 KRTAP11-1Q8IUC1 163 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 GBP7Q8N8V2 638 aaPredicted RBP2.47□□□□□ -2.01
VPS50-216ENST00000484954 TDRD5Q8NAT2 981 aaKnown RBP2.47□□□□□ -2.01
VPS50-216ENST00000484954 KLHL30-AS1Q8NEE0 82 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 OR4D10Q8NGI6 311 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 NXPE2Q96DL1 559 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 ATF6BQ99941 703 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 ACTL8Q9H568 366 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 IL1RAPQ9NPH3 570 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 TSPAN16Q9UKR8 245 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 SPATA31D1Q6ZQQ2 1576 aa2.47□□□□□ -2.01
VPS50-216ENST00000484954 MAGEB2O15479 319 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 DIAPH2O60879 1101 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 STARD3NLO95772 234 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 CETN2P41208 172 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 ITPK1Q13572 414 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 KIAA0141Q14154 515 aaPredicted RBP2.46□□□□□ -2.02
VPS50-216ENST00000484954 MAPRE1Q15691 268 aaKnown RBP2.46□□□□□ -2.02
VPS50-216ENST00000484954 FAM106AQ4KMX7 169 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 ERMARDQ5T6L9 678 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 ATP1A1-AS1Q5TC04 95 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 PIGWQ7Z7B1 504 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 KCNMB4Q86W47 210 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 RNF130Q86XS8 419 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 RYBPQ8N488 228 aaPredicted RBP2.46□□□□□ -2.02
VPS50-216ENST00000484954 POGLUT1Q8NBL1 392 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 OR4C15Q8NGM1 316 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 RPLP0P6Q8NHW5 317 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 SPPL2AQ8TCT8 520 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 NSMAFQ92636 917 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 SPSB1Q96BD6 273 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 RBM41Q96IZ5 413 aaKnown RBP2.46□□□□□ -2.02
VPS50-216ENST00000484954 SPATA33Q96N06 139 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 SDCBP2Q9H190 292 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 RIMS4Q9H426 269 aaPredicted RBP2.46□□□□□ -2.02
VPS50-216ENST00000484954 JPT2Q9H910 190 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 WDR35Q9P2L0 1181 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 PILRBQ9UKJ0 227 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 PILRAQ9UKJ1 303 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 POMT2Q9UKY4 750 aa2.46□□□□□ -2.02
VPS50-216ENST00000484954 A0A1W2PQ72 361 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 ARHGEF33A8MVX0 844 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 H3BMM5 538 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 ZNF749O43361 778 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 RPLP0P05388 317 aaKnown RBP2.45□□□□□ -2.02
VPS50-216ENST00000484954 ADRB2P07550 413 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 PRG2P13727 222 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 ACHEP22303 614 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 PIK3R1P27986 724 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 DLK1P80370 383 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 ILF2Q12905 390 aaKnown RBP2.45□□□□□ -2.02
VPS50-216ENST00000484954 SIX1Q15475 284 aaPredicted RBP2.45□□□□□ -2.02
VPS50-216ENST00000484954 C9orf152Q5JTZ5 239 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 KRT39Q6A163 491 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 RBPMS2Q6ZRY4 209 aaKnown RBP2.45□□□□□ -2.02
VPS50-216ENST00000484954 SLC22A15Q8IZD6 547 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 TTC30BQ8N4P2 665 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 XXYLT1Q8NBI6 393 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 PYCR2Q96C36 320 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 LRRC3BQ96PB8 259 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 UBAC1Q9BSL1 405 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 POLR3GLQ9BT43 218 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 MAF1Q9H063 256 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 PLCL2Q9UPR0 1127 aa2.45□□□□□ -2.02
VPS50-216ENST00000484954 PASKQ96RG2 1323 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 ATRXP46100 2492 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 URADA6NGE7 173 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 TRAFD1O14545 582 aaPredicted RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 STAG3L1P0CL83 205 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 CPT2P23786 658 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 SFTPDP35247 375 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 GSK3BP49841 420 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 UPP1Q16831 310 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 CRY2Q49AN0 593 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 LBHQ53QV2 105 aaPredicted RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 NAA16Q6N069 864 aaPredicted RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 VITQ6UXI7 678 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 CCDC60Q8IWA6 550 aaPredicted RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 MAML2Q8IZL2 1156 aaPredicted RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 APCDD1Q8J025 514 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 FGFRL1Q8N441 504 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 OR4Q3Q8NH05 313 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 CHURC1Q8WUH1 139 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 C11orf52Q96A22 123 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 ZNF558Q96NG5 402 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 SLITRK2Q9H156 845 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 FZD8Q9H461 694 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 XAB2Q9HCS7 855 aaKnown RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 MORF4L1Q9UBU8 362 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 FBXL4Q9UKA2 621 aa2.44□□□□□ -2.02
VPS50-216ENST00000484954 MRPS18CQ9Y3D5 142 aaKnown RBP2.44□□□□□ -2.02
VPS50-216ENST00000484954 KLF2Q9Y5W3 355 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms