RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 GALNT4Q8N4A0 578 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 FAM86B1Q8N7N1 296 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF548Q8NEK5 533 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 SETD7Q8WTS6 366 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 SLC29A1Q99808 456 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 KCNH6Q9H252 994 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRM3Q9NNZ6 103 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 ARMC1Q9NVT9 282 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDHGB4Q9UN71 923 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 NCKAP1Q9Y2A7 1128 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 MAN2B2Q9Y2E5 1009 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDHGB5Q9Y5G0 923 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 SLCO1B1Q9Y6L6 691 aa8.49□□□□□ -1.05
CDC42SE1-204ENST00000483763 HEATR5BQ9P2D3 2071 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C15orf38-AP3S2A0A0A6YYH1 394 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 GNG14A0A1W2PPG7 69 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PDZK1P1A8MUH7 402 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PEX1O43933 1283 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDH7O60245 1069 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 HOXB3P14651 431 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 MAPK1P28482 360 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 GZMMP51124 257 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 NRF1Q16656 503 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 UAP1L1Q3KQV9 507 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PAGE2BQ5JRK9 111 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 FAM180BQ6P0A1 224 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 GALNT18Q6P9A2 607 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PRR23BQ6ZRT6 265 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 ARPINQ7Z6K5 226 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CLEC4FQ8N1N0 589 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 ABHD11Q8NFV4 315 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR8J2Q8NGG1 315 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR2A1Q8NGT9 310 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SH3KBP1Q96B97 665 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PPWD1Q96BP3 646 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 BIRC7Q96CA5 298 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CAMK1GQ96NX5 476 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C1QTNF7Q9BXJ2 289 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF717Q9BY31 904 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 TMEM168Q9H0V1 697 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C6orf106Q9H6K1 298 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SYNPO2LQ9H987 977 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 DTNAQ9Y4J8 743 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PCDHB3Q9Y5E6 796 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CFAP54Q96N23 3096 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 A0A096LPI6 279 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C7orf72A4D263 438 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C10orf142B7Z368 130 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 RTCAO00442 366 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 RFXANKO14593 260 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PPM1DO15297 605 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 LCMT2O60294 686 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 ERN1O75460 977 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 RECKO95980 971 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 RPN2P04844 631 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 KLK1P06870 262 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CHRNB1P11230 501 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 COX7A2P14406 83 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 GLULP15104 373 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 GGT1P19440 569 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 IDSP22304 550 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 TIA1P31483 386 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CTBSQ01459 385 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C16orf72Q14CZ0 275 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 RBBP5Q15291 538 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 RPE65Q16518 533 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 MPEG1Q2M385 716 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 FBXO43Q4G163 708 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 ZNF385BQ569K4 471 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SPIN4Q56A73 249 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 EOGTQ5NDL2 527 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 TBCELQ5QJ74 424 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 C17orf64Q86WR6 236 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 TRIM69Q86WT6 500 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SFTPA2Q8IWL1 248 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR2T12Q8NG77 320 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 OR52E1Q8NGJ3 308 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SNRNP27Q8WVK2 155 aaKnown RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 REPS1Q96D71 796 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 PANX1Q96RD7 426 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SEPHS2Q99611 448 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CIB1Q99828 191 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 CPPED1Q9BRF8 314 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 HAUS8Q9BT25 410 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 COQ10BQ9H8M1 238 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 SPHK1Q9NYA1 384 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 ICKQ9UPZ9 632 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 INVSQ9Y283 1065 aa8.48□□□□□ -1.05
CDC42SE1-204ENST00000483763 TRBV23OR9-2A0A075B6M9 112 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 SCAMP2O15127 329 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 SNRNP200O75643 2136 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 IGHV4-34P06331 123 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 HNRNPA2B1P22626 353 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 PIK3CBP42338 1070 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 RAB28P51157 221 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 C21orf58P58505 322 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 GK3PQ14409 553 aa8.47□□□□□ -1.05
CDC42SE1-204ENST00000483763 NFATC4Q14934 902 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms