RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 NFATC4Q14934 902 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 PDK3Q15120 406 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 ANXA8L1Q5VT79 327 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 TMEM154Q6P9G4 183 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 KIAA1324Q6UXG2 1013 aaKnown RBP12.71□□□□□ -0.37
CPNE1-225ENST00000483495 ZBTB49Q6ZSB9 765 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 FAM124AQ86V42 546 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 EPHX4Q8IUS5 362 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 C10orf111Q8N326 155 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 OR2L8Q8NGY9 312 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 SH3KBP1Q96B97 665 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 FAM120BQ96EK7 910 aaKnown RBP12.71□□□□□ -0.37
CPNE1-225ENST00000483495 OR2M4Q96R27 311 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 CIB1Q99828 191 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 CHID1Q9BWS9 393 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 REEP4Q9H6H4 257 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 CD93Q9NPY3 652 aa12.71□□□□□ -0.37
CPNE1-225ENST00000483495 ATG2BQ96BY7 2078 aa12.71□□□□□ -0.38
CPNE1-225ENST00000483495 NUMA1Q14980 2115 aa12.71□□□□□ -0.38
CPNE1-225ENST00000483495 CXCR6O00574 342 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 RNASET2O00584 256 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 SMNDC1O75940 238 aaKnown RBP eCLIP12.7□□□□□ -0.381e-15■■■■□ 21.1
CPNE1-225ENST00000483495 RAP2AP10114 183 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CKMT2P17540 419 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 IL1RNP18510 177 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 RPL3P39023 403 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 SMAD4Q13485 552 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 FAM71E1Q6IPT2 247 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 UGT2A3Q6UWM9 527 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF551Q7Z340 670 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 SLC9B2Q86UD5 537 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 VPS37AQ8NEZ2 397 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CDC26Q8NHZ8 85 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 WDR48Q8TAF3 677 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 C16orf78Q8WTQ4 265 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 FIG4Q92562 907 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 MYOCQ99972 504 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 TBCDQ9BTW9 1192 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 BHLHE41Q9C0J9 482 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 YY1AP1Q9H869 796 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 OLAHQ9NV23 265 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 IMP3Q9NV31 184 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CUEDC1Q9NWM3 386 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 SCOCQ9UIL1 159 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 TCRBV21S2A2A0A5A6 115 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 LRRC72A6NJI9 287 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 EIF4E1BA6NMX2 242 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 EVPLLA8MZ36 301 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CLIC1O00299 241 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 TXNDC9O14530 226 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 MBTPS2O43462 519 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 TPST1O60507 370 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CREG1O75629 220 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 PRSS23O95084 383 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 EPN2O95208 641 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 APBB3O95704 486 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 UBTFL6P0CB48 400 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 GABRG2P18507 467 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 HNRNPA2B1P22626 353 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 IGFBP4P22692 258 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 PSMB5P28074 263 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CLCN2P51788 898 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CLDN2P57739 230 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 SLC14A1Q13336 389 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 RBBP5Q15291 538 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 RPE65Q16518 533 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 NRF1Q16656 503 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 FAM98BQ52LJ0 330 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 DEPDC1Q5TB30 811 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 ANKRD26P1Q6NSI1 321 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 WASH2PQ6VEQ5 465 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 IKBIPQ70UQ0 350 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 R3HCC1LQ7Z5L2 792 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 SPRED1Q7Z699 444 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CLECL1Q8IZS7 167 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 ANKRD53Q8N9V6 530 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 MFSD2AQ8NA29 543 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 GOT1L1Q8NHS2 421 aaPredicted RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 FAM3CQ92520 227 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 MTERF3Q96E29 417 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 BMFQ96LC9 184 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 C9orf16Q9BUW7 83 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 OSBPL11Q9BXB4 747 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 MS4A8Q9BY19 250 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 UGT2B28Q9BY64 529 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 DCAF13Q9NV06 445 aaKnown RBP12.7□□□□□ -0.38
CPNE1-225ENST00000483495 AHSPQ9NZD4 102 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 ZNF639Q9UID6 485 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 MOSPD1Q9UJG1 213 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 PCDHB11Q9Y5F2 797 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 HEBP2Q9Y5Z4 205 aa12.7□□□□□ -0.38
CPNE1-225ENST00000483495 BRWD1Q9NSI6 2320 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 C1orf226A1L170 272 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 FAM149AA5PLN7 773 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 ANKDD1BA6NHY2 528 aa12.69□□□□□ -0.38
CPNE1-225ENST00000483495 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms