RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SPARCL1Q14515 664 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 GRM7Q14831 915 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ZNF169Q14929 603 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 BRD3Q15059 726 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 PDCD1Q15116 288 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 PCBP2Q15366 365 aaKnown RBP eCLIP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 SPA17Q15506 151 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 RBBP7Q16576 425 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 PARP6Q2NL67 630 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TUBB8Q3ZCM7 444 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TCTE1Q5JU00 501 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CATSPEREQ5SY80 951 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 C1QL3Q5VWW1 255 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 B3GNTL1Q67FW5 361 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 FCRL6Q6DN72 434 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 C11orf63Q6NUN7 778 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 FAM180AQ6UWF9 173 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 PACS1Q6VY07 963 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ARHGEF18Q6ZSZ5 1173 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TTLL10Q6ZVT0 673 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 KCNMB4Q86W47 210 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 VSTM4Q8IW00 320 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CMIPQ8IY22 773 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 DNAJC22Q8N4W6 341 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TTC29Q8NA56 475 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CCDC110Q8TBZ0 833 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 GRHL3Q8TE85 626 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 FAR1Q8WVX9 515 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 KRT35Q92764 455 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CDKN2AIPNLQ96HQ2 116 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CNDP1Q96KN2 507 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 NRTNQ99748 197 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TSSK1BQ9BXA7 367 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 OSBPL8Q9BZF1 889 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 LHPPQ9H008 270 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 MS4A5Q9H3V2 200 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 GOLPH3Q9H4A6 298 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 WDR54Q9H977 334 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 LRRC40Q9H9A6 602 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ZBTB20Q9HC78 741 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TNFRSF12AQ9NP84 129 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 SPHK1Q9NYA1 384 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 EURLQ9NYK6 297 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 IL1RAPL1Q9NZN1 696 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ADAMTS6Q9UKP5 1117 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 ENTPD4Q9Y227 616 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 OSGIN2Q9Y236 505 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 NTNG1Q9Y2I2 539 aa5.62□□□□□ -1.51
CSDE1-207ENST00000483407 TNRC6AQ8NDV7 1962 aaKnown RBP5.62□□□□□ -1.51
CSDE1-207ENST00000483407 SLC5A10A0PJK1 596 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 ARHGAP10A1A4S6 786 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 HEATR9A2RTY3 570 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 GOLGA6L9A6NEM1 432 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 AKR1B15C9JRZ8 316 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PRSS44E7EML9 344 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 MASP2O00187 686 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 E2F3O00716 465 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 DSCR3O14972 297 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PSMD3O43242 534 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 HCRTR1O43613 425 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 SNUPNO95149 360 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 ONECUT2O95948 504 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 GAS8O95995 478 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 DBHP09172 617 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PRSS56P0CW18 603 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 TPH1P17752 444 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 MAGP20916 626 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 CCND1P24385 295 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PKLRP30613 574 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 SSTR4P31391 388 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 CTNNA1P35221 906 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PTPN7P35236 360 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PPARGP37231 505 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 MARCKSL1P49006 195 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 CARSP49589 748 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 NAP1L1P55209 391 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 SCAND1P57086 179 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 FOXL2P58012 376 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 OCA2Q04671 838 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 POU6F1Q14863 301 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 ZRSR2Q15696 482 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 FAM214AQ32MH5 1076 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 P3H1Q32P28 736 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 DNAJC21Q5F1R6 531 aaKnown RBP5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PGM2L1Q6PCE3 622 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 TTC23LQ6PF05 361 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PAQR3Q6TCH7 311 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 KIRREL2Q6UWL6 708 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 IGFL2Q6UWQ7 119 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 ISLR2Q6UXK2 745 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 DCUN1D3Q8IWE4 304 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 PIANPQ8IYJ0 282 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 RAB42Q8N4Z0 105 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 BCORP1Q8N888 145 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 FLVCR1-AS1Q8TAF5 88 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 GSDMBQ8TAX9 411 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 ASZ1Q8WWH4 475 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 RAB11FIP5Q9BXF6 653 aa5.61□□□□□ -1.51
CSDE1-207ENST00000483407 SLC26A1Q9H2B4 701 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms