RNA–Protein interactions for RNA: ENST00000483344.1

FNDC3B-210, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3

Gene FNDC3B, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-210ENST00000483344 ST8SIA6P61647 398 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 SNRPD1P62314 119 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 TMEM30BQ3MIR4 351 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 IQCCQ4KMZ1 466 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 PRSS55Q6UWB4 352 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 SLC24A5Q71RS6 500 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 BTN2A1Q7KYR7 527 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 CPEB2Q7Z5Q1 589 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 CCDC91Q7Z6B0 441 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 PRUNE1Q86TP1 453 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 ANKRD46Q86W74 232 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 CCDC170Q8IYT3 715 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 GPC2Q8N158 579 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 NUP93Q8N1F7 819 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 GATAD1Q8WUU5 269 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 GMPPAQ96IJ6 420 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 NECTIN4Q96NY8 510 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 HNRNPABQ99729 332 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 LITAFQ99732 161 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 PIGQQ9BRB3 760 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 ATG101Q9BSB4 218 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 RBM4Q9BWF3 364 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 WDR13Q9H1Z4 485 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 UBQLN3Q9H347 655 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 MMADHCQ9H3L0 296 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 C10orf88Q9H8K7 445 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 IARS2Q9NSE4 1012 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 TMEM161AQ9NX61 479 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 RNF186Q9NXI6 227 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 NOCTQ9UK39 431 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 FBXL5Q9UKA1 691 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 ELF5Q9UKW6 265 aaPredicted RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 AGTPBP1Q9UPW5 1226 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 PA2G4Q9UQ80 394 aaKnown RBP3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 TSPOAP1O95153 1857 aa3.87□□□□□ -1.79
FNDC3B-210ENST00000483344 A0A087WUV0 522 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 A0A0B4J203 849 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 MEIOCA2RUB1 952 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 EDIL3O43854 480 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 IGLV1-44P01699 117 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 EEF2P13639 858 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 RPL35AP18077 110 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 ELAVL4P26378 380 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 COPB2P35606 906 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 FRKP42685 505 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 LEPRP48357 1165 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 CLDN17P56750 224 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 ASIC1P78348 528 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 PTPN14Q15678 1187 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 FGD3Q5JSP0 725 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 LEKR1Q6ZMV7 388 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 Q6ZSR9 355 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 Q6ZTC4 211 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 PTAR1Q7Z6K3 402 aaPredicted RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 HOGA1Q86XE5 327 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 CLYBLQ8N0X4 340 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 DCLK2Q8N568 766 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 AMER3Q8N944 861 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 ZNRF4Q8WWF5 429 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 CKAP2Q8WWK9 683 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 AZIN2Q96A70 460 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 RBM41Q96IZ5 413 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 TSSK2Q96PF2 358 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 BARHL1Q9BZE3 327 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 NYXQ9GZU5 481 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 EGLN3Q9H6Z9 239 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 SRD5A3Q9H8P0 318 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 TXLNGQ9NUQ3 528 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 TBC1D13Q9NVG8 400 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 ATAD3AQ9NVI7 634 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 DNAJC17Q9NVM6 304 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 GPR132Q9UNW8 380 aa3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 MRPS28Q9Y2Q9 187 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 HBS1LQ9Y450 684 aaKnown RBP3.86□□□□□ -1.79
FNDC3B-210ENST00000483344 TRBV4-1A0A0J9YWV2 114 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 ZNF195O14628 629 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 ZNF263O14978 683 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 CRCPO75575 148 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 RAD51DO75771 328 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 SLC16A8O95907 504 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 GH1P01241 217 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 C8orf89P0DMQ9 161 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 DLATP10515 647 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 CYP2A7P20853 494 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 RBMS1P29558 406 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 OR3A3P47888 321 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 SNU13P55769 128 aaKnown RBP3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 PAX9P55771 341 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 DCDC1P59894 354 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 CETN1Q12798 172 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 EFTUD2Q15029 972 aaKnown RBP eCLIP3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 SGSM1Q2NKQ1 1148 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 KBTBD12Q3ZCT8 623 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 ODF2Q5BJF6 829 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 ZNF789Q5FWF6 425 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 GLRA4Q5JXX5 417 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 ADAMTSL4-AS1Q5T5F5 129 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 OR4C11Q6IEV9 310 aa3.85□□□□□ -1.79
FNDC3B-210ENST00000483344 PWWP2BQ6NUJ5 590 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms